Detailed information of TA system TA152847

Bioinformatically predicted

Overview

TA module

• Type: II
• Classification (family/domain): BrnTA/BrnT-BrnA
• Location: 2763..3351
• Replicon: plasmid pPM192696_2
• Accession: NZ_CP050414
• Organism: Acinetobacter baumannii strain PM192696

Toxin (Protein)

• Gene name: brnT
• Uniprot ID: A0A3G6Z3M6
• Locus tag: HB366_RS19470
• Protein ID: WP_000438826.1
• Coordinates: 2763..3050 (+)
• Length: 96 a.a.

Antitoxin (Protein)

• Gene name: brnA
• Uniprot ID: N9M5I3
• Locus tag: HB366_RS19475
• Protein ID: WP_001983304.1
• Coordinates: 3037..3351 (+)
• Length: 105 a.a.

Genomic Context

Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description
HB366_RS19450	1..951	+	951	WP_001205343.1	replication initiation protein RepM	-
HB366_RS19455	944..1519	+	576	WP_001096616.1	helix-turn-helix domain-containing protein	-
HB366_RS19460	1539..1682	+	144	WP_001125246.1	hypothetical protein	-
HB366_RS19465	1872..2390	-	519	WP_000447193.1	sel1 repeat family protein	-
HB366_RS19470	2763..3050	+	288	WP_000438826.1	BrnT family toxin	Toxin
HB366_RS19475	3037..3351	+	315	WP_001983304.1	BrnA antitoxin family protein	Antitoxin
HB366_RS19480	3479..5890	+	2412	WP_000932953.1	TonB-dependent receptor ZnuD2	-
HB366_RS19485	6195..6656	+	462	WP_000761346.1	DIP1984 family protein	-
HB366_RS19490	6979..7152	-	174	WP_001282484.1	hypothetical protein	-
HB366_RS19495	7152..7523	-	372	WP_000504218.1	hypothetical protein	-

Associated MGEs

MGE detail	Similar MGEs	Relative position	MGE Type	Cargo ARG	Virulence gene	Coordinates	Length (bp)
	-	inside	Non-Mobilizable plasmid	-	-	1..8732	8732

Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.

Domains

Predicted by InterproScan

Toxin

• Ribonuclease toxin, BrnT, of type II toxin-antitoxin system (7-88)

Antitoxin

• BrnA antitoxin of type II toxin-antitoxin system (41-96)

Sequences

Toxin

Protein

• Length: 96 a.a.
• Molecular weight: 11303.72 Da
• Isoelectric Point: 6.0889

>T152847 WP_000438826.1 NZ_CP050414:2763-3050 [Acinetobacter baumannii]
MEQYFEWDEAKNRKNQKKHDISFETASLVFEDPLRISIQDRHTNGEERWQTIGRVKGVLMLLVAHTIFDEDDCEIIRIIS
ARQVTKAERNKYEHG

Nucleotide

• Length: 288 bp

>T152847 NZ_CP066544:c19269-19120 [Klebsiella pneumoniae]
ATGACGAAATATGCCCTTATCGGGTTGCTCGCCGTGTGTGCCACGGTATTGTGTTTTTCACTGATATTCAGGGAACGGTT
ATGTGAACTGAATATTCACAGGGGAAATACAGTGGTGCAGGTAACTCTGGCCTACGAAGCACGGAAGTAA

Antitoxin

Protein

• Length: 105 a.a.
• Molecular weight: 12208.84 Da
• Isoelectric Point: 7.2026

>AT152847 WP_001983304.1 NZ_CP050414:3037-3351 [Acinetobacter baumannii]
MSMVRYSHKELNEKFGEKQDAEIQRLLAKGTVPDDQLDLSDIPEITDWSNAVRQNQFYRPVKQQTSIRLDADVLAWFKAQ
GKGYQTRMNEILRDAMLKELKNHQ

Nucleotide

• Length: 315 bp

>AT152847 NZ_CP066544:19314-19373 [Klebsiella pneumoniae]
TAAGTACTTCATGCAGACCTCACGAGTTAATGGATTAACGAGTGGGGTCTTCGCATTTCT

Structures

Toxin

• AlphaFold DB: A0A3G6Z3M6

Antitoxin

• AlphaFold DB: N9M5I3