151748

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) PsyrTA/-
Location 2704016..2706330 Replicon chromosome
Accession NZ_CP049902
Organism Psychrobacter sp. WY6

Toxin (Protein)


Gene name PsyrT Uniprot ID -
Locus tag G7Y90_RS13465 Protein ID WP_250162620.1
Coordinates 2704016..2704981 (+) Length 322 a.a.

Antitoxin (Protein)


Gene name PsyrA Uniprot ID -
Locus tag G7Y90_RS13470 Protein ID WP_250162621.1
Coordinates 2704978..2706330 (+) Length 451 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
G7Y90_RS13435 2699637..2700494 - 858 WP_250162614.1 protein phosphatase 2C domain-containing protein -
G7Y90_RS13440 2700977..2701354 + 378 WP_250162615.1 hypothetical protein -
G7Y90_RS13445 2701464..2702279 + 816 WP_250162616.1 hypothetical protein -
G7Y90_RS13450 2702892..2703227 + 336 WP_250162617.1 hypothetical protein -
G7Y90_RS13455 2703305..2703631 + 327 WP_250162618.1 DEAD/DEAH box helicase -
G7Y90_RS13460 2703577..2703948 + 372 WP_250162619.1 helicase-related protein -
G7Y90_RS13465 2704016..2704981 + 966 WP_250162620.1 phosphoribosyltransferase family protein Toxin
G7Y90_RS13470 2704978..2706330 + 1353 WP_250162621.1 DNA-processing protein DprA Antitoxin
G7Y90_RS13475 2706761..2706922 - 162 Protein_2675 IS256 family transposase -
G7Y90_RS13480 2706989..2708154 + 1166 Protein_2676 IS3 family transposase -
G7Y90_RS13485 2708573..2708704 - 132 Protein_2677 molybdenum cofactor guanylyltransferase -
G7Y90_RS13490 2708708..2709238 - 531 WP_089555991.1 molybdenum cofactor biosynthesis protein B -
G7Y90_RS13495 2709305..2710428 - 1124 Protein_2679 GTP 3',8-cyclase MoaA -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Phosphoribosyltransferase domain

(191-304)

Antitoxin

DNA recombination-mediator protein A

(93-291)


Sequences

Toxin        


Download         Length: 322 a.a.        Molecular weight: 35737.84 Da        Isoelectric Point: 8.3850

>T151748 WP_250162620.1 NZ_CP049902:2704016-2704981 [Psychrobacter sp. WY6]
MENSDSLSIRSMEEQTNLRHGQIEKVLKLLSVESPAPVIKDGSRWVRTPVPYKMDHARITHLTGQRVQEWQEVKKYLDNT
NCKMTFLRRALDDLDPTPCGKCSSCLGQPVINISVDPTLAHRAGTFLKHAEMVITPKAQVAANAFLDYGFRGNLPQKLRA
QEGRVLSRWGDAGWGKMVANNKHAGRFSDELVEAIAEMIQQRWQPNPAPQWVCCVPSRYHSELVPGFAQRLADRLGLPFV
DAVSKIKDNQPQKGQQNRFHQCRNLDGVFAVTQPYEGQAVLLVDDIVDSGWTLTVIAALLQQAGSGLVYPIALASSSVKD
S

Download         Length: 966 bp

>T151748 NZ_CP065695:3642411-3642836 [Delftia acidovorans]
ATGATCGTTGTCGATACCAACGTCATTTCGGAACTCTGGAGGCTTGCGCCCGACTCCAGAGTGCTTGCCTGGATGGACGC
CCAGGCCATTGAAACGCTGCATCTGTCTGCCGTCACCGTGGCAGAACTGCGCTACGGCATTGCAGCGATGCCTGAGGGAA
GGCGCCGCACCATCTACCAGGAGCGACTGGAGCATGAGGTTCTGCCGGCCTTCGCCGGCCGTGTCCTGGCCTTTGACCTG
GACGCGGCAAAGGCCTATGCCGATCTGATGGCGAGCGCGAAGACGCAGGGCAGGGCCATCGCCAAGGCCGATGGCTATAT
AGCGGCCACTGCCATGGCGCATGGGCTGGTGGTGGCAACGCGCGACACCCGTCCGTTCGAGGCCGGTGGGCTGCAGACCA
TCAATCCCTGGACGGCAGCGCCCTAG

Antitoxin


Download         Length: 451 a.a.        Molecular weight: 49209.89 Da        Isoelectric Point: 6.0955

>AT151748 WP_250162621.1 NZ_CP049902:2704978-2706330 [Psychrobacter sp. WY6]
MNASNLLSPTAQATLLLTSYFSKSSNESAKPLSNAEWGRFALWLKEKSITPADLLVGDPQALLQGWHDTRISAERIIELL
KRGHSLALAMEKWQRAGLWVVTRSDAEYPKRLKQRLKTDCPPVLFGCGNKDLLNSGGLAVIGSRNASDPDLAFTDQIGAK
AASENIAIISGGARGVDETVMIGAMRQGGMVVGVMADRLLRAATSSKWRQGLMDGHVVLISPFYPEAGFNVGNAMARNKY
IYCLADSSLVIHSGKKGGTLSGAQENLKKSWVPLWIKQTTDKDAANADLVAKGGNWLKADIQAFTITDLVSSKENLVNQV
SEPIGDLFSKYAQPELFAEADFKPAPKSESEKDVNGVESDRTVIELQADIGSGSEEAAESNTTQLEPIDFYQLFSFELQR
LAENPLTVDELIESTKLHKSQLTEWLKRAVDDGVVKKLNRPVRYQVKNSE

Download         Length: 1353 bp

>AT151748 NZ_CP065695:3642157-3642414 [Delftia acidovorans]
ATGGCCAATGTGACTGTGAGAAACCTGCCCGATGCCGTGCACCGGGCCTTGCGGGTACGCGCTGCCCACCATGGCCGCAG
TACGGAGGCGGAAATCCGCGACATTCTGGAAGCCGCCGTCCGGCCGGAAGAGCGTGTCAGGCTCGGCTCCATGCTGGCGT
CCATTGCCCGCGAGGCAGGAGGACTGACCGACTCCGAAGCCGAGGGCTTCAACCGCCTGCGCGACAGGGCGCCAGCCGAG
CCCATGGACTTTGAATGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References