Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/RelE-RHH
Location 1411984..1412478 Replicon chromosome
Accession NZ_CP049889
Organism Jeotgalibaca porci strain CCUG 69148

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag G7058_RS07295 Protein ID WP_166062904.1
Coordinates 1411984..1412256 (-) Length 91 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag G7058_RS07300 Protein ID WP_166062905.1
Coordinates 1412257..1412478 (-) Length 74 a.a.

Genomic Context

G7058_RS07275G7058_RS07280G7058_RS07285G7058_RS07305G7058_RS07290G7058_RS07295G7058_RS07300G7058_RS07310G7058_RS07315
Location: 1408194..1409141 (948 bp)
Type: Others
Protein ID: WP_166062900.1
Location: 1409566..1410474 (909 bp)
Type: Others
Protein ID: WP_166062901.1
Location: 1410474..1411262 (789 bp)
Type: Others
Protein ID: WP_166062902.1
Location: 1412639..1413322 (684 bp)
Type: Others
Protein ID: WP_166062906.1
Location: 1411313..1411720 (408 bp)
Type: Others
Protein ID: WP_166062903.1
Location: 1411984..1412256 (273 bp)
Type: Toxin
Protein ID: WP_166062904.1
Location: 1412257..1412478 (222 bp)
Type: Antitoxin
Protein ID: WP_166062905.1
Location: 1413380..1415212 (1833 bp)
Type: Others
Protein ID: WP_166062907.1
Location: 1415230..1415664 (435 bp)
Type: Others
Protein ID: WP_166062908.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
G7058_RS072751408194..1409141+948WP_166062900.1nucleoside hydrolase-
G7058_RS072801409566..1410474+909WP_166062901.1ABC transporter ATP-binding protein-
G7058_RS072851410474..1411262+789WP_166062902.1ABC transporter permease subunit-
G7058_RS072901411313..1411720-408WP_166062903.1hypothetical protein-
G7058_RS072951411984..1412256-273WP_166062904.1type II toxin-antitoxin system RelE/ParE family toxinToxin
G7058_RS073001412257..1412478-222WP_166062905.1ribbon-helix-helix protein, CopG familyAntitoxin
G7058_RS073051412639..1413322+684WP_166062906.1DUF697 domain-containing protein-
G7058_RS073101413380..1415212-1833WP_166062907.1ABC transporter ATP-binding protein/permease-
G7058_RS073151415230..1415664-435WP_166062908.1MarR family transcriptional regulator-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(7-89)

Antitoxin

Protein of unknown function DUF6290

(1-71)


Sequences

Toxin        


Download         Length: 91 a.a.        Molecular weight: 10502.14 Da        Isoelectric Point: 10.0028

>T151746 WP_166062904.1 NZ_CP049889:c1412256-1411984 [Jeotgalibaca porci]
MNSKYKVEFENGAQKTLKKLDKHQALLIMGWIQKNLVNCTNPRLHGKGLTANRSGEWRYRIGDYRLIADINDETVTILML
QIGHRKDIYD

Download         Length: 273 bp

>T151746 NZ_CP065695:c2312032-2311178 [Delftia acidovorans]
ATGACCGCGCAGACGCTGCAGCGCATGGAACAGCGCCTTCAGACGCAGTTCCCCGAACACCTCATCGCCCTGCCCGGTGG
CGCTCAGGCCGCCTGGCGCGAGGCCGGCGACACGGCCTCGGACTTTGCCGTGGTGATGCTGCACGGCATCAGCTCGGGCG
CCGCCTCCTGGCTGGACGTGGCCCTGGAGCTGGCGCCGCGCGCGCGTGTGCTGGCCTGGGACGCGCCCGGCTATGGCCGC
TCCACGCCGCTGGCACCCGACGCGCCCACGGGCGCCGACTACGCCCGCGTGCTGGAGCAGTCGCTGCAGGCGCTGGGCGT
GCGCCGCTGCCTGCTGGTGGGCCACTCGCTGGGTGCGCTCATGGGCACGCCCTGGGCGGTGCAGGCCGGTGCCGGGCGCG
TGCAGCAACTGGTGCTGATCAGCCCCGCTGGCGGCTATGGCGCACCCGGCATGGGCGAGCAGCAGGCCAAGGTACGCCAG
GGCCGTCTTGCGGCCCTTCAGGAAAAAGGCATCGAAGGCCTGGCCGCCGCCATCGACCAGCGCCTGGTCTCGCCCGCCGC
GCCCGAGCCCGTGCGCCAATGGGTGCGCTGGAACACGGCGCGCCTGCATGCTGCCGGCTACGCCCAGGCCGTGGAGCTGC
TGTGCGGCAGCGACCTGGGGCAGGCGGCGGGGCAACTGGCCATGCCGGTCGAGGTCTGGGTGGGAGAGCACGACGTGGTC
ACGCCGCCCGCCGCCTGTGCGGCCTGGGCCGCAAGGCTGGGCGCCCGGTACGTTACGCTTGCGGCAGCCGGCCATGCCTC
TGTCGTCGAACAACCTGCGGATGTCGCACAGAGGCTGGCCACCCTGCTGACCTGA

Antitoxin


Download         Length: 74 a.a.        Molecular weight: 8470.62 Da        Isoelectric Point: 4.3885

>AT151746 WP_166062905.1 NZ_CP049889:c1412478-1412257 [Jeotgalibaca porci]
MTVISLRLDEQEDKLIKEYAKTKNISVSALIRSSVLEKIEDEIDLGLYNQAMKEHRENPQSISFEDMLKELSD

Download         Length: 222 bp

>AT151746 NZ_CP065695:c2311155-2310349 [Delftia acidovorans]
ATGAGCGACACCTCCGAAACCCTCTCGAACGACAACGACCGCTACACCGTCCCCGCGCTGGAGCGCGGCCTGCGCCTGCT
GGCCTGCTTCACGCCTTCGCAGCCCGTGTGGAGCGCGCCCGACCTGGCGCGCACCCTGGCGCTGCCGCGTTCCACGGTGT
TCCGGATGCTGACGACGCTGGAGAACATGGGGTATCTGCAACGCTCGGGCACCGAGTACCGGCTGGGCCTGTCCGTGCTG
CGCCTGGGCTACGACTACCTGTCCACCCAGCCGCTGGCCCAGCTGGCCGAGCCCGTGCTGCAGGCGCTGTGCGAGCGCCT
GGGCTTCACCACCAACCTGGCGCTGCTGGACGGCACCTCCGTAGTCTACGTGGCGCGCATCGCGCCGGCCGGCGCCTTCC
AGGGCGCCGTGCGCGTGGGCTCGCGCCTGCCGGCCCATGCCACCGTGCTGGGCCGCGCCCTGCTGCAGGACATGGACGCA
GACCAGCTGCGCGAACTCTTCGGCGGCAGCGAGCTGCCGCAATTCTCGGAAAGCACCCCGCGCGACGTGCAGCAACTGCA
GCAGTTGCTGCTGCAGGACCGCGAGCGCGGCTACGCCATGGGCGAGGGCTTCTACGAGCCCGGCGTCTCCAGCATTGCCG
CACCCGTGCGCGATGCGCAGGGCCGCATCATCGCGGGCCTGGGCATGGCCGTGGCCTTTACCGAAATCGCACCCGGGCGC
ATGGCGCACTGGGTGGAACAGGTGCGCGAGGCCGCCGTCGAACTGACGGGCCACCTGCGCACCCAGCATCCTGGTTTTCT
GCGCTGA

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
No matching records found

Antitoxin

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Source
ID
Structure
No matching records found

References