Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) NpoTA/ParE(toxin)
Location 4971487..4972728 Replicon chromosome
Accession NZ_CP049258
Organism Nordella sp. HKS 07

Toxin (Protein)


Gene name NpoT Uniprot ID -
Locus tag G5V57_RS23340 Protein ID WP_165169927.1
Coordinates 4972486..4972728 (+) Length 81 a.a.

Antitoxin (Protein)


Gene name NpoA Uniprot ID -
Locus tag G5V57_RS23335 Protein ID WP_165169926.1
Coordinates 4971487..4972473 (+) Length 329 a.a.

Genomic Context

G5V57_RS23325G5V57_RS23330G5V57_RS23335G5V57_RS23340G5V57_RS23320G5V57_RS23345G5V57_RS23350G5V57_RS23355G5V57_RS23360G5V57_RS23365
Location: 4968817..4970523 (1707 bp)
Type: Others
Protein ID: WP_165169924.1
Location: 4971213..4971407 (195 bp)
Type: Others
Protein ID: WP_165169925.1
Location: 4971487..4972473 (987 bp)
Type: Antitoxin
Protein ID: WP_165169926.1
Location: 4972486..4972728 (243 bp)
Type: Toxin
Protein ID: WP_165169927.1
Location: 4967120..4968385 (1266 bp)
Type: Others
Protein ID: WP_165174232.1
Location: 4973109..4973609 (501 bp)
Type: Others
Protein ID: WP_165169928.1
Location: 4973825..4974715 (891 bp)
Type: Others
Protein ID: WP_165169929.1
Location: 4975027..4975581 (555 bp)
Type: Others
Protein ID: WP_165169930.1
Location: 4975608..4976360 (753 bp)
Type: Others
Protein ID: WP_165169931.1
Location: 4976504..4976977 (474 bp)
Type: Others
Protein ID: WP_165169932.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
G5V57_RS233204967120..4968385-1266WP_165174232.1MFS transporter-
G5V57_RS233254968817..4970523+1707WP_165169924.1HAD hydrolase family protein-
G5V57_RS233304971213..4971407+195WP_165169925.1hypothetical protein-
G5V57_RS233354971487..4972473+987WP_165169926.1SDR family oxidoreductaseAntitoxin
G5V57_RS233404972486..4972728+243WP_165169927.1plasmid stabilization proteinToxin
G5V57_RS233454973109..4973609-501WP_165169928.1ferritin-like domain-containing protein-
G5V57_RS233504973825..4974715-891WP_165169929.1hypothetical protein-
G5V57_RS233554975027..4975581-555WP_165169930.1hypothetical protein-
G5V57_RS233604975608..4976360-753WP_165169931.1inorganic diphosphatase-
G5V57_RS233654976504..4976977-474WP_165169932.1hypothetical protein-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.


Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 81 a.a.        Molecular weight: 8880.99 Da        Isoelectric Point: 11.9541

>T151092 WP_165169927.1 NZ_CP049258:4972486-4972728 [Nordella sp. HKS 07]
MPRGDKSSYTGKQKRRAEHIEEGYEKRGVSRKEAAKRAWATVNKESGGGKKSRSGRGKAENRSASRRGGHKVAAKKQARR

Download         Length: 243 bp

>T151092 NZ_CP065232:1139202-1139627 [Thalassospira sp. B30-1]
ATGATTCTGCTGGATACAAACGTTATATCGGAGCAGTTTCGAGCCGTACCCGATGAAACGGTGATTGACTGGTTGAATCG
TCAGCCGCTGGAAACGCTTTATCTGGCATCCATGACCGTGGCCGAACTGCGGGCCGGTGTTGCCCTGATGCCCGCAGGTA
AGCGCCGGACAGTGCTCGGTGACAGCATCGAACACCAGGTGTTGCCGGTATTTGTGGGCCGGGTGTTGCCGTTTGATATG
GCTTGCACACGCGCCTATGCCGATGTGCTGGCAGCCGCCCGCAAGGCCGGTAGCGGCATCGAGGCCGCTGATGCCGTCAT
AGCGGCGATTGCCCTGGAGAGCGGTTTCAGCGTGGCAACAAGGGACGTAAGCCCGTTTCTGGCGGCCGGCGTGAACGTCA
TCAACCCTTGGGAAGATCAAGAGTAA

Antitoxin


Download         Length: 329 a.a.        Molecular weight: 35514.63 Da        Isoelectric Point: 9.1641

>AT151092 WP_165169926.1 NZ_CP049258:4971487-4972473 [Nordella sp. HKS 07]
MAPRRPTRKASSKTAVAAGRRIQSAVDRRDRKRSPKKSSSKPMQSGKRAYPKAFPAQHLTKPGVEDDLSYPPLFQAPGYQ
GSEKLKDMVALITGGDSGIGRAIAVLYAREGADIAIAYLNEHDDAEITKAAVEREGSRCLLLPGDVRMAGFCNKAVEETI
RTFGKLDILVNNAAFQEHEYDIEDLSDEHFDHTLKTNLYGYFYMARAAVPHLKPGGSIVMTGSVTGIMGSKHLLDYSMTK
GGIHAFTRSLAGHLIERGIRVNAVAPGPVWTPLNPADKPAKDVKDFGADTPMKRAAQPEEIAPAFVFLAAPCCSSYITGE
VLPIVGGY

Download         Length: 987 bp

>AT151092 NZ_CP065232:1138957-1139205 [Thalassospira sp. B30-1]
ATGAGAGCAGTAACGATCAGGAATGTACCGGAAGAGGTGCATCGTGCCATCCGGGTTAGGGCAGCGCAGAATGGCCGTAC
CTTGCAAGCCGAGATGTGCGAAATATTGGCTACCGCTGTAAAACCGGAAGGTCGGGTAAAGCTGGGTGACTTATTGGCAG
GTATCGGGCGCAAGGTGAAATTGACCGACGAAGAAATGACGGTTTTTGACCGTGACCATTCACCCGCCCGCGCAGCGAGT
TTTGAATGA

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
No matching records found

Antitoxin

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Source
ID
Structure
No matching records found

References