Detailed information of TA system TA151081

Bioinformatically predicted

Overview

TA module

• Type: II
• Classification (family/domain): BrnTA/BrnT-BrnA
• Location: 2253891..2254462
• Replicon: chromosome
• Accession: NZ_CP049241
• Organism: Rhizobium pseudoryzae strain DSM 19479

Toxin (Protein)

• Gene name: brnT
• Uniprot ID: -
• Locus tag: G6N78_RS10925
• Protein ID: WP_165218290.1
• Coordinates: 2253891..2254139 (+)
• Length: 83 a.a.

Antitoxin (Protein)

• Gene name: brnA
• Uniprot ID: -
• Locus tag: G6N78_RS10930
• Protein ID: WP_165218292.1
• Coordinates: 2254136..2254462 (+)
• Length: 109 a.a.

Genomic Context

Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description
G6N78_RS10900	2249306..2250082	-	777	WP_165218282.1	3-hydroxybutyrate dehydrogenase	-
G6N78_RS10905	2250189..2250686	-	498	WP_165218284.1	hypothetical protein	-
G6N78_RS10910	2250872..2251576	-	705	WP_165218286.1	glutathione S-transferase N-terminal domain-containing protein	-
G6N78_RS10915	2251959..2253023	+	1065	WP_165221632.1	LLM class flavin-dependent oxidoreductase	-
G6N78_RS10920	2253045..2253800	+	756	WP_165218288.1	type I methionyl aminopeptidase	-
G6N78_RS10925	2253891..2254139	+	249	WP_165218290.1	BrnT family toxin	Toxin
G6N78_RS10930	2254136..2254462	+	327	WP_165218292.1	BrnA antitoxin family protein	Antitoxin
G6N78_RS10935	2254639..2255805	+	1167	WP_165218294.1	YbfB/YjiJ family MFS transporter	-
G6N78_RS10940	2255880..2257820	-	1941	WP_165218296.1	methyl-accepting chemotaxis protein	-

Associated MGEs

MGE detail	Similar MGEs	Relative position	MGE Type	Cargo ARG	Virulence gene	Coordinates	Length (bp)

Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.

Domains

Predicted by InterproScan

Toxin

• Ribonuclease toxin, BrnT, of type II toxin-antitoxin system (5-78)

Antitoxin

• BrnA antitoxin of type II toxin-antitoxin system (28-106)

Sequences

Toxin

Protein

• Length: 83 a.a.
• Molecular weight: 9009.55 Da
• Isoelectric Point: 9.9231

>T151081 WP_165218290.1 NZ_CP049241:2253891-2254139 [Rhizobium pseudoryzae]
MKIIYDEGKRLSNLEKHGLDFADLTIEFFAASTVIPAKSGRFMAIGELDGRIIIAVVFRPLGAEALSVISMRPASSKERS
VR

Nucleotide

• Length: 249 bp

>T151081 NZ_CP065228:1100529-1100858 [Xanthomonas oryzae pv. oryzae]
TTGCATCATGTCGCCGAACGCCGATGGCCGTTTCTGTTTACTGACAGCCACGCCTACTGCCAGTTGGCGAGCTTCTATTC
CGAGTTATCTGATCTCGACAAGATCGACTGGCCGTTGCTCCAAGCACGCGATTTCCGGCGCGACCCAGACGACCCAGCCA
AGTTCGAGCGCTATCAGGCCGAGGCCCTGATTCACCGACACTTGCCGCTTGATGGCCTGCGCGGCATTGTGTGTCATACG
GATGGTTTGAAACAGACCATCGAGCGGCAACTCCAAGAGCGAAACCTGAAATTGCCGGTTCATACCCGCACCGATTGGTA
TTTCCGATGA

Antitoxin

Protein

• Length: 109 a.a.
• Molecular weight: 11975.57 Da
• Isoelectric Point: 4.9829

>AT151081 WP_165218292.1 NZ_CP049241:2254136-2254462 [Rhizobium pseudoryzae]
MTAKFASRRPLTEDEETEIQRMIASDPDAPEASDAEIAEARPFAAVFPEMAASIDREIARRGPGRPPVESPKVAVTIRVE
PEVLQRFQAQGKDWRSRMTEALRKAAGL

Nucleotide

• Length: 327 bp

>AT151081 NZ_CP065228:1100855-1101274 [Xanthomonas oryzae pv. oryzae]
ATGATCACGTTTACACAAGGCAATCTACTGGAGTCTGGCGCAGAGGCGCTGGTCAACACCGTCAACACCGTCGGCGTGAT
GGGCAAGGGCATCGCGCTGATGTTCAAGGAGCGCTTCAAGGAGAACTTCCTCCGATATGCCGCCGCCTGCAAAGACAACC
AATTGCGCATTGGCAAAATTTTCGTCACCGAAGTCAACGAACTGGACGGGCCACGCTGGATCATCAATTTTCCGACCAAA
CAGCACTGGCGTGGCGATTCCCGCATCGAATGGATCACTGAAGGATTGCAGGACTTGCACCGTTTTCTGATCGAGAACAA
AGTCAAATCCATTGCCATCCCGCCACTGGGCGCGGGCAATGGAGGATTGGACTGGGCCGAGGTGCGCCCACTGATCGAAG
AAGTACTAGGGAACCTCTGA