Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | EcnAB/- |
| Location | 4078265..4078652 | Replicon | chromosome |
| Accession | NZ_CP049017 | ||
| Organism | Xanthomonas theicola strain CFBP 4691 | ||
Toxin (Protein)
| Gene name | EcnB | Uniprot ID | A0A0K2ZHE5 |
| Locus tag | G4Q83_RS19080 | Protein ID | WP_003469322.1 |
| Coordinates | 4078518..4078652 (+) | Length | 45 a.a. |
Antitoxin (Protein)
| Gene name | EcnA | Uniprot ID | - |
| Locus tag | G4Q83_RS19075 | Protein ID | WP_128419193.1 |
| Coordinates | 4078265..4078417 (+) | Length | 51 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G4Q83_RS19035 | 4073495..4073665 | + | 171 | Protein_3752 | hypothetical protein | - |
| G4Q83_RS19040 | 4073905..4074231 | + | 327 | WP_128419189.1 | metal/formaldehyde-sensitive transcriptional repressor | - |
| G4Q83_RS19045 | 4074228..4075337 | + | 1110 | WP_128419190.1 | S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | - |
| G4Q83_RS19050 | 4075407..4075979 | + | 573 | WP_128419191.1 | S-(hydroxymethyl)glutathione synthase | - |
| G4Q83_RS19055 | 4076059..4076889 | + | 831 | WP_128419192.1 | S-formylglutathione hydrolase | - |
| G4Q83_RS19060 | 4076938..4077123 | - | 186 | WP_170069131.1 | hypothetical protein | - |
| G4Q83_RS19065 | 4077142..4077452 | - | 311 | Protein_3758 | transposase | - |
| G4Q83_RS19070 | 4077540..4078120 | + | 581 | Protein_3759 | arginase family protein | - |
| G4Q83_RS19075 | 4078265..4078417 | + | 153 | WP_128419193.1 | entericidin A/B family lipoprotein | Antitoxin |
| G4Q83_RS19080 | 4078518..4078652 | + | 135 | WP_003469322.1 | entericidin A/B family lipoprotein | Toxin |
| G4Q83_RS19085 | 4078872..4079090 | + | 219 | Protein_3762 | DUF4102 domain-containing protein | - |
| G4Q83_RS19090 | 4079108..4079496 | + | 389 | Protein_3763 | IS5 family transposase | - |
| G4Q83_RS19095 | 4079595..4080407 | - | 813 | WP_128419233.1 | cellulase | - |
| G4Q83_RS19100 | 4080963..4081364 | + | 402 | WP_128419194.1 | LysR family transcriptional regulator | - |
| G4Q83_RS19105 | 4081578..4081862 | + | 285 | WP_158254966.1 | hypothetical protein | - |
| G4Q83_RS19110 | 4082172..4082486 | + | 315 | WP_128419196.1 | nuclear transport factor 2 family protein | - |
| G4Q83_RS19115 | 4082675..4083013 | + | 339 | WP_128419197.1 | hypothetical protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 45 a.a. Molecular weight: 4604.40 Da Isoelectric Point: 9.2977
>T150298 WP_003469322.1 NZ_CP049017:4078518-4078652 [Xanthomonas theicola]
MKRTFAWMLLAMFSVGLLSGCNTVAGAGKDVKSAGEKVEDAAKN
MKRTFAWMLLAMFSVGLLSGCNTVAGAGKDVKSAGEKVEDAAKN
Download Length: 135 bp
>T150298 NZ_CP064671:c1054667-1054140 [Salmonella sp. SJTUF14152]
ATGATGTTTACAGACTGGCATGAGGCCGCGATAGGGAAAACCCACAATCGAATGAATTTTGATTGTGGGGATGCCGATCT
GAACCAATTCCTGCAACGCCATGCACGACAAAATCATGAGAAAGGGACAACGAAAACCTATGTTGCGCTTGATAATTCGG
ATGTTACACGTATCCACGGCTTTTACTCAGTCAGTCCTGCATCACTGATATATGCACAGGTTCCCGGCGCAATCAGCAAA
GGATTAGGGAGATATGATGTGCCAGTGTTTCGTCTGGGTCGTTTAGCCGTAGACAAATCTATGCAGGGGCAAGGGCTGGG
AGCACAACTTTTGTTATCTGCCGGAAAGCGTTGCATACAGGCGGCTTTGCAGGTCGGTAGCGTAGCCCTGCTTATTGATG
CCAAAAATAAACAGGTCTGCGACTGGTACAAAGGATTTGGCGCAGTACCATTAAACGATCAACCCCTTTCCTTGTTGCTG
TCGTTTAAAACGCTTTATGCTGCTTTATCTGCATCTGGTAGGTTATGA
ATGATGTTTACAGACTGGCATGAGGCCGCGATAGGGAAAACCCACAATCGAATGAATTTTGATTGTGGGGATGCCGATCT
GAACCAATTCCTGCAACGCCATGCACGACAAAATCATGAGAAAGGGACAACGAAAACCTATGTTGCGCTTGATAATTCGG
ATGTTACACGTATCCACGGCTTTTACTCAGTCAGTCCTGCATCACTGATATATGCACAGGTTCCCGGCGCAATCAGCAAA
GGATTAGGGAGATATGATGTGCCAGTGTTTCGTCTGGGTCGTTTAGCCGTAGACAAATCTATGCAGGGGCAAGGGCTGGG
AGCACAACTTTTGTTATCTGCCGGAAAGCGTTGCATACAGGCGGCTTTGCAGGTCGGTAGCGTAGCCCTGCTTATTGATG
CCAAAAATAAACAGGTCTGCGACTGGTACAAAGGATTTGGCGCAGTACCATTAAACGATCAACCCCTTTCCTTGTTGCTG
TCGTTTAAAACGCTTTATGCTGCTTTATCTGCATCTGGTAGGTTATGA
Antitoxin
Download Length: 51 a.a. Molecular weight: 5231.19 Da Isoelectric Point: 7.5954
>AT150298 WP_128419193.1 NZ_CP049017:4078265-4078417 [Xanthomonas theicola]
MKRLLTSMLLTLFCAGMLTGCNTMAGAGKDMQKAGEKVEDKAGDCSDGKC
MKRLLTSMLLTLFCAGMLTGCNTMAGAGKDMQKAGEKVEDKAGDCSDGKC
Download Length: 153 bp
>AT150298 NZ_CP064671:c1054954-1054664 [Salmonella sp. SJTUF14152]
ATGAAAACCATGCCTCAGATAGCTATAGAATCTAACGAAAGGCTGTCGTTGCGTGTATCGACGGATGCCAAAAAGTTGAT
AGTCCGCGCTGCGGCAATCCAGCAAACCAACCTGACGGATTTTGTGGTCAGTAACGTACTACCTGTCGCACAGAAGATTG
TTGATGCCGCCGAACGGGTATATCTGACGGAGCGCGATACTAAAATGATCATGGAAATTTTAGATAACCCGCCAGCGCCG
AATGAAAAGCTTCTTGCCGCTGCTTTCGCCCTGCCGGACATGAAGAAATGA
ATGAAAACCATGCCTCAGATAGCTATAGAATCTAACGAAAGGCTGTCGTTGCGTGTATCGACGGATGCCAAAAAGTTGAT
AGTCCGCGCTGCGGCAATCCAGCAAACCAACCTGACGGATTTTGTGGTCAGTAACGTACTACCTGTCGCACAGAAGATTG
TTGATGCCGCCGAACGGGTATATCTGACGGAGCGCGATACTAAAATGATCATGGAAATTTTAGATAACCCGCCAGCGCCG
AATGAAAAGCTTCTTGCCGCTGCTTTCGCCCTGCCGGACATGAAGAAATGA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|