Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) parE_1-relB/-
Location 1768649..1769121 Replicon chromosome
Accession NZ_CP049017
Organism Xanthomonas theicola strain CFBP 4691

Toxin (Protein)


Gene name parE_1 Uniprot ID -
Locus tag G4Q83_RS08100 Protein ID WP_128421893.1
Coordinates 1768840..1769121 (+) Length 94 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag G4Q83_RS08095 Protein ID WP_128421892.1
Coordinates 1768649..1768840 (+) Length 64 a.a.

Genomic Context

G4Q83_RS08070G4Q83_RS08075G4Q83_RS08080G4Q83_RS08085G4Q83_RS08090G4Q83_RS08095G4Q83_RS08100G4Q83_RS08105G4Q83_RS08110G4Q83_RS08115G4Q83_RS08120G4Q83_RS08125
Location: 1764448..1765431 (984 bp)
Type: Others
Protein ID: WP_185817191.1
Location: 1765605..1766414 (810 bp)
Type: Others
Protein ID: WP_128421888.1
Location: 1766414..1766797 (384 bp)
Type: Others
Protein ID: WP_128421889.1
Location: 1766797..1767984 (1188 bp)
Type: Others
Protein ID: WP_128421890.1
Location: 1767986..1768636 (651 bp)
Type: Others
Protein ID: WP_128421891.1
Location: 1768649..1768840 (192 bp)
Type: Antitoxin
Protein ID: WP_128421892.1
Location: 1768840..1769121 (282 bp)
Type: Toxin
Protein ID: WP_128421893.1
Location: 1769165..1769443 (279 bp)
Type: Others
Protein ID: WP_128421894.1
Location: 1769716..1770147 (432 bp)
Type: Others
Protein ID: Protein_1595
Location: 1770572..1772422 (1851 bp)
Type: Others
Protein ID: WP_128420036.1
Location: 1772432..1772578 (147 bp)
Type: Others
Protein ID: WP_158255003.1
Location: 1772734..1773873 (1140 bp)
Type: Others
Protein ID: WP_128420035.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
G4Q83_RS080701764448..1765431+984WP_185817191.1IS5 family transposase-
G4Q83_RS080751765605..1766414+810WP_128421888.1hypothetical protein-
G4Q83_RS080801766414..1766797+384WP_128421889.1DUF2523 domain-containing protein-
G4Q83_RS080851766797..1767984+1188WP_128421890.1hypothetical protein-
G4Q83_RS080901767986..1768636+651WP_128421891.1conjugal transfer protein-
G4Q83_RS080951768649..1768840+192WP_128421892.1stability determinantAntitoxin
G4Q83_RS081001768840..1769121+282WP_128421893.1type II toxin-antitoxin system RelE/ParE family toxinToxin
G4Q83_RS081051769165..1769443-279WP_128421894.1hypothetical protein-
G4Q83_RS081101769716..1770147-432Protein_1595IS200/IS605 family transposase-
G4Q83_RS081151770572..1772422-1851WP_128420036.1monovalent cation:proton antiporter-2 (CPA2) family protein-
G4Q83_RS081201772432..1772578-147WP_158255003.1hypothetical protein-
G4Q83_RS081251772734..1773873-1140WP_128420035.1molybdopterin-synthase adenylyltransferase MoeB-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
-insideIScluster/Tn--1760214..17701479933
-insideProphage--1729024..177014741123


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(4-91)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 94 a.a.        Molecular weight: 10605.40 Da        Isoelectric Point: 6.7144

>T150294 WP_128421893.1 NZ_CP049017:1768840-1769121 [Xanthomonas theicola]
MLPILWRESADADLAVIIDYVGQFDLAAAERLWQLLRASVLPLAEHPYLHPQSWRVPGCREIVVTRNYVVLYRVTVAAVE
VVAVVHARREFPV

Download         Length: 282 bp

>T150294 NZ_CP064667:184636-185961 [Salmonella sp. SJTUF14154]
ATGAGCCGGAAACAGCAACGTCTGGTAATTTGGATGAACGGCATCAAAGTCGGGTACTGGGAAAAAAGCAAAGGGGTAGA
CAGCTTAGAATACCTTCCTGAATGGGTTGCTGACGAACAGGGAAGGCCGCTGTCATTGTCCCTTCCTTTTACTCCCGGGA
ACCAGGTCTGGCGTGGAAATGTGGTACGTGACTATTTTGATAATTTACTGCCGGACAGCGAAGGCATACGCAGACGTCTG
GCAATGCGTTACAAGGCCGATAGCCTGGAGCCTTTTGATCTGCTGACGGAGCTGGGAAAAGACTGCGTGGGCGCGATACA
GCTGCTTCATGACGGAGATGAACCCACTGATTTATATTCCGTGAAGTATCACCCGCTTACTGAATCAGAAATTGCGGCAA
CTTTGCGTAATACCACGGAGACATTGCTACCGGGCAGGCCAGAAGATAACGACGACTTACGTTTATCTATTGCCGGTGCT
CAGGAGAAAACAGCCCTACTGTGGCATGAAGATCGGTGGTGTATGCCGGAGGGTAATACACCAACGACGCATATATTCAA
GCTACCGCTCGGACTTGTGGGGAACATGAAAGCCGACATGAGCTCGTCGGTTGAAAATGAATGGCTCTGCTCGGTACTTC
TCGGCCAGTACGGGCTCCCCGTGGCAAGAACGCAGATTGCTCACTTTGAAGATCAGAAAGCGCTGGTGGTAGAACGTTTT
GACCGAAAATGGTCAGGAGACGGACAATGGATCATTCGTTTACCCCAGGAGGATATGTGTCAGGCCCTGGGCGTTTCGCC
ATTACGAAAATATCAGGCGGACGGCGGGCCAGGTATATCGGAAATTATGGAGGTTCTGAGTAATTCAGACCGTGCTGAGC
GTGACAAAGCGCAGTTTTTTATGACGCAGATAATTTTCTGGATGATGGCCGCAACAGATGGCCACGCTAAAAATTTCAGT
ATTTCTATTGGGCCACAGGGACGTTATCACCTTACACCAAACTATGATGTGTTGTCGGCATGGCCGGTGATCGGTCATGG
GAACAATCAGATATCCTGGCAGAAGTGCAAACTGGCGATGGCCGTACGTGGCAGTAGCAACTATTACCAGATATATCGAA
TACAACGACGCCACTGGATCAGGCATGGTGAGATAACCGGCCTGAGTAAACAGCAGACAGAGGCGATGATAGAGGAAATC
ATCGCCAGAACCCCGGGTGTCATTGAACGTGTTAGCGGGCTTCTTCCGGACCAGTTCCCCCAGCAGCTTGCGGAAAGTAT
TTTTGATGGAATGAGGCAGCAATGCAGGCGCCTGGCTGAGAAATGA

Antitoxin


Download         Length: 64 a.a.        Molecular weight: 7030.82 Da        Isoelectric Point: 5.0053

>AT150294 WP_128421892.1 NZ_CP049017:1768649-1768840 [Xanthomonas theicola]
MNNVRSPLAYEFETADAEANYDAWLRTKVAASVADSSPLIPHDEVERRMAERLTALKAKHSAD

Download         Length: 192 bp

>AT150294 NZ_CP064667:184338-184631 [Salmonella sp. SJTUF14154]
ATCAATAATGATTACCCGTTAAACACGCTCAACCAGCTGCGTCCCTTGCTCATTGGTTTTCGCAAGGCGAATGGCCTGAC
GCAAAAAGACCTGTCCGAAAGGTTAGGCGTCACTCAACAGACATACTCACGTCTGGAAGCCAACCCTGCCAGTGCGAGCA
TTGAACGGCTATTCAAGGTGTTTTCCATCCTGGGCGTAAAAATCAGCTTCTCCTCGGCAACCACCTCTTCAGAGAGGAAG
CAGACGGAAGAAATGCTTAAATCAAACTCACCTGCACGACAGGAGGATTGGTAA

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
No matching records found

Antitoxin

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Source
ID
Structure
No matching records found

References