149871

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/YoeB-RelB
Location 651043..651553 Replicon chromosome
Accession NZ_CP048670
Organism Acinetobacter sp. YH12138 strain YH12138_T

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag G0029_RS03075 Protein ID WP_180107261.1
Coordinates 651043..651306 (-) Length 88 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag G0029_RS03080 Protein ID WP_180107263.1
Coordinates 651290..651553 (-) Length 88 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
G0029_RS03055 646413..647345 - 933 WP_180005012.1 tRNA-dihydrouridine synthase -
G0029_RS03060 647795..648004 + 210 WP_067761877.1 cold-shock protein -
G0029_RS03065 648154..648963 - 810 WP_078191164.1 cytochrome c biogenesis protein CcsA -
G0029_RS03070 649102..650505 + 1404 WP_078191163.1 signal recognition particle protein -
G0029_RS03075 651043..651306 - 264 WP_180107261.1 Txe/YoeB family addiction module toxin Toxin
G0029_RS03080 651290..651553 - 264 WP_180107263.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin
G0029_RS03085 652629..652823 + 195 WP_180107265.1 hypothetical protein -
G0029_RS03090 652918..653484 + 567 WP_111884791.1 alpha/beta hydrolase -
G0029_RS03095 653486..654217 - 732 WP_180107268.1 type III pantothenate kinase -
G0029_RS03100 654240..654995 - 756 WP_180107270.1 biotin--[acetyl-CoA-carboxylase] ligase -
G0029_RS03105 655025..655837 + 813 WP_180078265.1 sulfite exporter TauE/SafE family protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin YoeB

(7-86)

Antitoxin

Type II toxin-antitoxin system, antitoxin Phd/YefM

(1-73)


Sequences

Toxin        


Download         Length: 88 a.a.        Molecular weight: 10327.75 Da        Isoelectric Point: 8.4730

>T149871 WP_180107261.1 NZ_CP048670:c651306-651043 [Acinetobacter sp. YH12138]
MKRKTSFTPSAWDDYVYWQSQDKKTLKRINNLIKECQRTPFEGIGKPEALLGDLSGFWSRRIDEQHRLVYAVTDAEITII
ACRYHYE

Download         Length: 264 bp

>T149871 NZ_CP064326:461750-462031 [Xylella fastidiosa subsp. multiplex]
ATGCGGAGGATTAGCCAGACTGGCCAATTCAAGCGCGACTACAAGCGCGAAGCTAAGGGCCAGCATCGCGCCACGCTTGA
TGAGGAACTGATACACGTCTTGGAAGCCTTGGCCTGTGATCATCCGTTGGAGCCACGCCACCACGATCACGCACTGACTG
GCGGCTGGAAAGATCACCGTGATTGCCACATCAAACCCGATTTGGTTCTGATATACCGGAAGCCCGACAACGAGACATTG
CAGCTCGTGCGCATTGGCTCACACAGCGAACTAGGCTTGTGA

Antitoxin


Download         Length: 88 a.a.        Molecular weight: 9813.04 Da        Isoelectric Point: 4.6239

>AT149871 WP_180107263.1 NZ_CP048670:c651553-651290 [Acinetobacter sp. YH12138]
MQVFTYTDARQNLKSVLDTVIEDADVAIITRKEGQHAVVMGQDYYNSVMETLHLMSSPKNAAHLANSIAEFRASKAIERE
LLDEKED

Download         Length: 264 bp

>AT149871 NZ_CP064326:461500-461763 [Xylella fastidiosa subsp. multiplex]
ATGTCTGCAAACGCAGTTGTCCGTGCCCGCGTTGACACGCACATCAAAGAAGAAGCATCAACCGTGCTGGCGACGATGGG
CCTAAGCGTGTCTGATGCGTTCCGTATGATGCTGACCCGCATTGCTCGTGAGAAAGCACTACCGTTCGAGCCGCTGGTGC
CGAACGAAACTACCATCGCAGCCATGCGTGAAGCCCGTGCTGGTCACCTCAAGAGCTTTGATAGTATTGAGGCGCTCATG
GCGGACTTGCATGCGGAGGATTAG

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References