Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type IV Classification (family/domain) cptAB/-
Location 571273..571933 Replicon chromosome
Accession NZ_CP048659
Organism Acinetobacter piscicola strain YH12207_T

Toxin (Protein)


Gene name cptA Uniprot ID -
Locus tag G0028_RS02760 Protein ID WP_180046460.1
Coordinates 571649..571933 (+) Length 95 a.a.

Antitoxin (Protein)


Gene name cptB Uniprot ID -
Locus tag G0028_RS02755 Protein ID WP_130074359.1
Coordinates 571273..571530 (+) Length 86 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
G0028_RS02730 566570..568060 + 1491 WP_174493371.1 NAD(P)/FAD-dependent oxidoreductase -
G0028_RS02735 568186..568527 + 342 WP_180046757.1 hypothetical protein -
G0028_RS02740 568562..569263 + 702 WP_015586042.1 IS1-like element ISPa14 family transposase -
G0028_RS02745 569330..569776 + 447 WP_180046462.1 alpha/beta hydrolase -
G0028_RS02750 569919..571091 - 1173 WP_130074358.1 acyl-CoA dehydrogenase family protein -
G0028_RS02755 571273..571530 + 258 WP_130074359.1 succinate dehydrogenase assembly factor 2 Antitoxin
G0028_RS02760 571649..571933 + 285 WP_180046460.1 hypothetical protein Toxin
G0028_RS02765 572485..573612 + 1128 WP_180046458.1 hypothetical protein -
G0028_RS02770 573699..574286 + 588 WP_130074362.1 rhombosortase -
G0028_RS02775 574647..576842 + 2196 WP_180046456.1 TRAP transporter large permease subunit -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- flank IS/Tn - - 568562..569263 701


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.


Antitoxin

Flavinator of succinate dehydrogenase

(10-82)


Sequences

Toxin        


Download         Length: 95 a.a.        Molecular weight: 11194.21 Da        Isoelectric Point: 7.9092

>T149865 WP_180046460.1 NZ_CP048659:571649-571933 [Acinetobacter piscicola]
MVAVFLLLISACFWHRQARIEQFEQLDVDLWSVKMTQDTVIQRVKIKKMVDHLFYIVIYFEDINALNKSSNIIIWHDQCD
LKSWKMLKAHANLG

Download         Length: 285 bp

>T149865 NZ_CP064325:1222398-1222679 [Xylella fastidiosa subsp. multiplex]
ATGATCAAAAGTTTCCGCCACAAAGGCATTCAACAATTCTTCCTTGTGGGATCAACCGCTGGTATCCAAACCAAACACGC
CGCCAAACTGCGTATCCAGCTCACCGCGTTGGAGAGTGCCAAGCGCCCCGAAGATATGAATGCTCCAGGCTGGAAACTGC
ACCCGCTAAAAGGCGCTGACTTAAAAGGTCATTGGTCCATCTGGGTGAATGGCAACTATCGCCTCACGTTTGCTTTTGAA
GGCGAAGACGCAATCTTGGTCGACTATCAGGATTACCACTAG

Antitoxin


Download         Length: 86 a.a.        Molecular weight: 10295.89 Da        Isoelectric Point: 4.7370

>AT149865 WP_130074359.1 NZ_CP048659:571273-571530 [Acinetobacter piscicola]
MFEELTLEERKVIYRARRGLKEIDVYFDPYVKQYYLQADATEKGLFKELVDQEDPDLLDWFMEVSEPPKPELRQLIIKLK
KYVHG

Download         Length: 258 bp

>AT149865 NZ_CP064325:1222042-1222341 [Xylella fastidiosa subsp. multiplex]
ATGACTATGTCTAAGACACTTCCCCCCATTCACCCAGGAGAAATTCTCCGGGAGGAGTTTATGGTCCCTCTAGGTCTGTC
CAGTAATGCGCTGGCTAAGGCCATTGGGGTGACGGCGGCACGCATCAATGAGATTGTGCGCGAGCGGCGCGGGATCACCG
CAGAGACTGCTTTGCGTCTGGCGCGCTACTTCGGTACCGATCCGCAAAGCTGGCTGAATTTGGAACAGCACTATGCGTTG
GAATGTGCCAAACGTGATCTTGGAGATGCGCTGTCACGGATTCATCCGCGAGTGGCTTGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References