Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | tacAT/DUF1778(antitoxin) |
| Location | 1078260..1078540 | Replicon | chromosome |
| Accession | NZ_CP048030 | ||
| Organism | Sinimarinibacterium sp. NLF-5-8 | ||
Toxin (Protein)
| Gene name | tacT | Uniprot ID | - |
| Locus tag | GT972_RS05375 | Protein ID | WP_202922515.1 |
| Coordinates | 1078391..1078540 (+) | Length | 50 a.a. |
Antitoxin (Protein)
| Gene name | tacA | Uniprot ID | - |
| Locus tag | GT972_RS05370 | Protein ID | WP_162077687.1 |
| Coordinates | 1078260..1078394 (+) | Length | 45 a.a. |
Genomic Context
Location: 1076524..1078137 (1614 bp)
Type: Others
Protein ID: WP_162077686.1
Type: Others
Protein ID: WP_162077686.1
Location: 1078260..1078394 (135 bp)
Type: Antitoxin
Protein ID: WP_162077687.1
Type: Antitoxin
Protein ID: WP_162077687.1
Location: 1078391..1078540 (150 bp)
Type: Toxin
Protein ID: WP_202922515.1
Type: Toxin
Protein ID: WP_202922515.1
Location: 1079816..1080556 (741 bp)
Type: Others
Protein ID: WP_202922517.1
Type: Others
Protein ID: WP_202922517.1
Location: 1081022..1082551 (1530 bp)
Type: Others
Protein ID: WP_162077692.1
Type: Others
Protein ID: WP_162077692.1
Location: 1082559..1082729 (171 bp)
Type: Others
Protein ID: WP_162077693.1
Type: Others
Protein ID: WP_162077693.1
Location: 1074936..1075949 (1014 bp)
Type: Others
Protein ID: WP_162077685.1
Type: Others
Protein ID: WP_162077685.1
Location: 1078615..1078956 (342 bp)
Type: Others
Protein ID: WP_162077688.1
Type: Others
Protein ID: WP_162077688.1
Location: 1078956..1079231 (276 bp)
Type: Others
Protein ID: WP_162077689.1
Type: Others
Protein ID: WP_162077689.1
Location: 1079279..1079830 (552 bp)
Type: Others
Protein ID: WP_202922516.1
Type: Others
Protein ID: WP_202922516.1
Location: 1082886..1083200 (315 bp)
Type: Others
Protein ID: WP_162077694.1
Type: Others
Protein ID: WP_162077694.1
Location: 1083197..1083538 (342 bp)
Type: Others
Protein ID: WP_162077695.1
Type: Others
Protein ID: WP_162077695.1
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Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GT972_RS05355 | 1074936..1075949 | - | 1014 | WP_162077685.1 | fructose-bisphosphate aldolase class I | - |
| GT972_RS05365 | 1076524..1078137 | + | 1614 | WP_162077686.1 | FMN-binding glutamate synthase family protein | - |
| GT972_RS05370 | 1078260..1078394 | + | 135 | WP_162077687.1 | DUF1778 domain-containing protein | Antitoxin |
| GT972_RS05375 | 1078391..1078540 | + | 150 | WP_202922515.1 | hypothetical protein | Toxin |
| GT972_RS05380 | 1078615..1078956 | - | 342 | WP_162077688.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| GT972_RS05385 | 1078956..1079231 | - | 276 | WP_162077689.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| GT972_RS15255 | 1079279..1079830 | - | 552 | WP_202922516.1 | hypothetical protein | - |
| GT972_RS15260 | 1079816..1080556 | + | 741 | WP_202922517.1 | hypothetical protein | - |
| GT972_RS05400 | 1081022..1082551 | + | 1530 | WP_162077692.1 | hypothetical protein | - |
| GT972_RS05405 | 1082559..1082729 | + | 171 | WP_162077693.1 | hypothetical protein | - |
| GT972_RS05410 | 1082886..1083200 | - | 315 | WP_162077694.1 | addiction module antidote protein | - |
| GT972_RS05415 | 1083197..1083538 | - | 342 | WP_162077695.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
Associated MGEs
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MGE detail | Similar MGEs | Relative position | MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| No matching records found | |||||||
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 50 a.a. Molecular weight: 5644.43 Da Isoelectric Point: 7.2780
>T148743 WP_202922515.1 NZ_CP048030:1078391-1078540 [Sinimarinibacterium sp. NLF-5-8]
MSLDLVALQPLTSDHHHTDLSCGELVLDEWLKRRTLANQVNRISRTFGR
MSLDLVALQPLTSDHHHTDLSCGELVLDEWLKRRTLANQVNRISRTFGR
Download Length: 150 bp
>T148743 NZ_CP063863:1879612-1879980 [Klebsiella pneumoniae]
ATGACGCTGCAGATTATCTCAGCGGAAGAGATAATACAGTTTCACGACAGGCTGCTCCGCGTCACGCCTGGCGTTGCCGG
TATGCCCGATCCGGGGCGTGCCGAAGCGATAATGTATAGGGTGCTAAACAAAATTGAATATGAAGGTGTGACAGACGTGT
GGCGACTCGCTGCGATGCATCTGCTGGCGATTTCTCGCGGTCATATATTTAATGATGGTAATAAGCGTACGGCACTGTTT
ATCACCCTGCTTTTTTTAAAGCGAAATGGAATTATATTGCCAGCGAATCCAGACTTCGTCGGCATGACCGTCGAGGCAGC
AGCAGGGCAACTTACCCTGGAACAGATTGTCGCGCGTTTGCGTGGATGA
ATGACGCTGCAGATTATCTCAGCGGAAGAGATAATACAGTTTCACGACAGGCTGCTCCGCGTCACGCCTGGCGTTGCCGG
TATGCCCGATCCGGGGCGTGCCGAAGCGATAATGTATAGGGTGCTAAACAAAATTGAATATGAAGGTGTGACAGACGTGT
GGCGACTCGCTGCGATGCATCTGCTGGCGATTTCTCGCGGTCATATATTTAATGATGGTAATAAGCGTACGGCACTGTTT
ATCACCCTGCTTTTTTTAAAGCGAAATGGAATTATATTGCCAGCGAATCCAGACTTCGTCGGCATGACCGTCGAGGCAGC
AGCAGGGCAACTTACCCTGGAACAGATTGTCGCGCGTTTGCGTGGATGA
Antitoxin
Download Length: 45 a.a. Molecular weight: 5019.78 Da Isoelectric Point: 5.6249
>AT148743 WP_162077687.1 NZ_CP048030:1078260-1078394 [Sinimarinibacterium sp. NLF-5-8]
VLDQVHFTLDADRFQQFAGLLDAPPRPDVGLERLFALKPIWNKA
VLDQVHFTLDADRFQQFAGLLDAPPRPDVGLERLFALKPIWNKA
Download Length: 135 bp
>AT148743 NZ_CP063863:1879394-1879615 [Klebsiella pneumoniae]
ATGAGAACGGTTAACTATAGCGAAGCCCGGCAAAATCTGGCCGATGTGCTGGAAAGCGCAGTGACAGGTGTACCTGTGAC
CATTACCCGTCGTGGGCATAAATCTGCAGTCATCATTAGTGCAGAAGAGTTTGAACGCTACCAGGCGGCCAGAATGGATG
ATGAGTTCGCGGCTATCATGGCGGTTCATGGTGATGAGATCAGGGAGCTTGCGGATAAATGA
ATGAGAACGGTTAACTATAGCGAAGCCCGGCAAAATCTGGCCGATGTGCTGGAAAGCGCAGTGACAGGTGTACCTGTGAC
CATTACCCGTCGTGGGCATAAATCTGCAGTCATCATTAGTGCAGAAGAGTTTGAACGCTACCAGGCGGCCAGAATGGATG
ATGAGTTCGCGGCTATCATGGCGGTTCATGGTGATGAGATCAGGGAGCTTGCGGATAAATGA