Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | mazEF/MazF(toxin) |
Location | 2779251..2779780 | Replicon | chromosome |
Accession | NZ_CP047861 | ||
Organism | Staphylococcus aureus strain UP_1322 |
Toxin (Protein)
Gene name | mazF | Uniprot ID | - |
Locus tag | E3S64_RS13835 | Protein ID | WP_000621175.1 |
Coordinates | 2779418..2779780 (+) | Length | 121 a.a. |
Antitoxin (Protein)
Gene name | mazE | Uniprot ID | T1YCG8 |
Locus tag | E3S64_RS13830 | Protein ID | WP_000948331.1 |
Coordinates | 2779251..2779421 (+) | Length | 57 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
E3S64_RS13800 | 2774288..2774848 | + | 561 | WP_001092411.1 | K(+)-transporting ATPase subunit C | - |
E3S64_RS13805 | 2775056..2775535 | + | 480 | WP_001287087.1 | hypothetical protein | - |
E3S64_RS13810 | 2775528..2777111 | + | 1584 | WP_001294626.1 | PH domain-containing protein | - |
E3S64_RS13815 | 2777098..2777589 | + | 492 | WP_001205912.1 | PH domain-containing protein | - |
E3S64_RS13820 | 2777593..2777952 | + | 360 | WP_000581197.1 | holo-ACP synthase | - |
E3S64_RS13825 | 2778018..2779166 | + | 1149 | WP_160195276.1 | alanine racemase | - |
E3S64_RS13830 | 2779251..2779421 | + | 171 | WP_000948331.1 | type II toxin-antitoxin system antitoxin MazE | Antitoxin |
E3S64_RS13835 | 2779418..2779780 | + | 363 | WP_000621175.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin |
E3S64_RS13840 | 2780130..2781131 | + | 1002 | WP_000390827.1 | PP2C family protein-serine/threonine phosphatase | - |
E3S64_RS13845 | 2781250..2781576 | + | 327 | WP_001052491.1 | anti-sigma factor antagonist | - |
E3S64_RS13850 | 2781578..2782057 | + | 480 | WP_001190829.1 | anti-sigma B factor RsbW | - |
E3S64_RS13855 | 2782032..2782802 | + | 771 | WP_001041111.1 | RNA polymerase sigma factor SigB | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 121 a.a. Molecular weight: 13441.69 Da Isoelectric Point: 10.1654
>T148402 WP_000621175.1 NZ_CP047861:2779418-2779780 [Staphylococcus aureus]
MIRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVEIEKKKYKLDKDSVILLEQIR
TLDKKRLKEKLTYLSDDKMKEVDNALMISLGLNAVAHQKN
MIRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVEIEKKKYKLDKDSVILLEQIR
TLDKKRLKEKLTYLSDDKMKEVDNALMISLGLNAVAHQKN
Download Length: 363 bp
>T148402 NZ_CP063511:3734800-3734907 [Escherichia coli]
ATGACGCTCGCGCAGTTTGCCATGACTTTCTGGCACGACCTGGCGGCACCGATCCTGGCGGGAATTATTACCGCAGCGAT
TGTCGGCTGGTGGCGTAACCGGAAGTAA
ATGACGCTCGCGCAGTTTGCCATGACTTTCTGGCACGACCTGGCGGCACCGATCCTGGCGGGAATTATTACCGCAGCGAT
TGTCGGCTGGTGGCGTAACCGGAAGTAA
Antitoxin
Download Length: 57 a.a. Molecular weight: 6251.78 Da Isoelectric Point: 3.8305
>AT148402 WP_000948331.1 NZ_CP047861:2779251-2779421 [Staphylococcus aureus]
MLSFSQNRSHSLEQSLKEGYSQMADLNLSLANEAFPIECEACDCNETYLSSNSTNE
MLSFSQNRSHSLEQSLKEGYSQMADLNLSLANEAFPIECEACDCNETYLSSNSTNE
Download Length: 171 bp
>AT148402 NZ_CP063511:c3734753-3734687 [Escherichia coli]
TGTCTGGTTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTTTACCTCTCAACGTGCGGGGGTTTTCT
TGTCTGGTTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTTTACCTCTCAACGTGCGGGGGTTTTCT
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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