Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) TsdAT/-
Location 2173473..2173987 Replicon chromosome
Accession NZ_CP047780
Organism Staphylococcus aureus strain UP_1539

Toxin (Protein)


Gene name TsdT Uniprot ID T1YA99
Locus tag E3T11_RS10470 Protein ID WP_000581792.1
Coordinates 2173778..2173987 (+) Length 70 a.a.

Antitoxin (Protein)


Gene name TsdA Uniprot ID W8UW13
Locus tag E3T11_RS10465 Protein ID WP_000138932.1
Coordinates 2173473..2173766 (+) Length 98 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
E3T11_RS10440 2168822..2169463 + 642 WP_000483153.1 thiamine phosphate synthase -
E3T11_RS10445 2169549..2170421 + 873 WP_000725802.1 membrane protein insertase YidC -
E3T11_RS10455 2171148..2171795 - 648 WP_001187634.1 HD domain-containing protein -
E3T11_RS10460 2171823..2173307 - 1485 WP_000571549.1 cardiolipin synthase -
E3T11_RS10465 2173473..2173766 + 294 WP_000138932.1 copper-sensing transcriptional repressor CsoR Antitoxin
E3T11_RS10470 2173778..2173987 + 210 WP_000581792.1 heavy-metal-associated domain-containing protein Toxin
E3T11_RS10475 2174115..2174252 + 138 WP_000828354.1 hypothetical protein -
E3T11_RS10480 2174516..2175718 - 1203 WP_001109939.1 rod shape-determining protein RodA -
E3T11_RS10485 2176036..2177106 + 1071 WP_000159631.1 D-alanine--D-alanine ligase -
E3T11_RS10490 2177121..2178479 + 1359 WP_000611465.1 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Heavy metal-associated domain, HMA

(23-66)

Antitoxin

Metal-sensitive transcriptional repressor

(14-92)


Sequences

Toxin        


Download         Length: 70 a.a.        Molecular weight: 7843.77 Da        Isoelectric Point: 4.1008

>T147587 WP_000581792.1 NZ_CP047780:2173778-2173987 [Staphylococcus aureus]
MIHQNTIYTAGIETEEQVSQLTERISNMIGVHQVNINIIDGQVTVSYETPANLNSIEKEIYDEGYKIVF

Download         Length: 210 bp

>T147587 NZ_CP063127:1620313-1620591 [Haemophilus influenzae]
ATGTACGCGATTGCTTTTGATTTAGTTGTAAAAGACACTCAAGATTATCATCCAAAGGGTGTTCAACAGGCTTATACAGA
CATTGGCGCAGTTTTAGCAAAATTTGGTTTTGTTAGAACACAAGGAAGTTTATATACCAATATGAATGAAGATATGGCGA
ATCTCTTTCAGGCAATGAATGCACTAAAACAGTTGGCGTGGATTTCTCAGTCTGTACGAGATATTCGCGCTTTTCGTATT
GAGCAATGGTCTGATTTTACTGATTTTATACGAAATTAA

Antitoxin


Download         Length: 98 a.a.        Molecular weight: 11197.82 Da        Isoelectric Point: 6.2243

>AT147587 WP_000138932.1 NZ_CP047780:2173473-2173766 [Staphylococcus aureus]
MTEQDNAHHSEQIKTNLKSRLNRIEGQVRAINRMIEEDVYCDDVLTQIRATRSALNSVAIKLLEQHMKSCIMNKVNQGAQ
EEAMEELLVTFQKLIKD

Download         Length: 294 bp

>AT147587 NZ_CP063127:1620113-1620304 [Haemophilus influenzae]
ATGGAACTAAGACAACAAATTCCAACAGGCTGTATTAAGCAATTTGGGCAATTTGGCGTGCCTTATGTGGTTGGCGAGGT
TGCGGAATTTTTGCCGGATGGCGATGCGTTGGTAAATATCACATTGTTACAATCTGGTGAAAAAGACATTTATCGCTTAT
CTCACCTGCTTGAAGATCCCGAAGCTGAATAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
PDB 6FF1

Antitoxin

Source ID Structure
AlphaFold DB W8UW13

References