Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relE-PumB/upstrm_HI1419-dnstrm_HI1420
Location 52116..52736 Replicon chromosome
Accession NZ_CP046337
Organism Burkholderia multivorans strain FDAARGOS_719

Toxin (Protein)


Gene name relE Uniprot ID A0A0H3KJN2
Locus tag FOC27_RS16455 Protein ID WP_012217495.1
Coordinates 52419..52736 (-) Length 106 a.a.

Antitoxin (Protein)


Gene name PumB Uniprot ID B9B269
Locus tag FOC27_RS16450 Protein ID WP_006398012.1
Coordinates 52116..52415 (-) Length 100 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
FOC27_RS16425 47353..48624 + 1272 WP_039225733.1 Rieske 2Fe-2S domain-containing protein -
FOC27_RS16430 48639..49127 + 489 WP_155824645.1 aromatic-ring-hydroxylating dioxygenase subunit beta -
FOC27_RS16435 49145..49471 + 327 WP_006404219.1 non-heme iron oxygenase ferredoxin subunit -
FOC27_RS16440 49461..50681 + 1221 WP_155824646.1 FAD-dependent oxidoreductase -
FOC27_RS16445 50795..52081 + 1287 WP_155824647.1 DUF445 domain-containing protein -
FOC27_RS16450 52116..52415 - 300 WP_006398012.1 putative addiction module antidote protein Antitoxin
FOC27_RS16455 52419..52736 - 318 WP_012217495.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin
FOC27_RS16465 53099..54739 + 1641 WP_060040466.1 acetolactate synthase large subunit -
FOC27_RS16470 54768..56201 + 1434 WP_039225726.1 aldehyde dehydrogenase family protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Addiction module killer protein, predicted

(9-102)

Antitoxin

Uncharacterized protein HI1420

(4-96)


Sequences

Toxin        


Download         Length: 106 a.a.        Molecular weight: 12110.94 Da        Isoelectric Point: 10.2349

>T144028 WP_012217495.1 NZ_CP046337:c52736-52419 [Burkholderia multivorans]
MPYLAPTFSIRTTAVFDAWFAGLQDRTAKRRIQARIDRLSMGNLGNWKSVGSPVYEMRIDHGPGYRVYFVRRRTIWVVLL
CGGDKSTQRDDIRAAHAMLEHLDLE

Download         Length: 318 bp

>T144028 NZ_CP061643:72784-73143 [Acinetobacter seifertii]
ATGGCTTGGGATGTAGAAACAACAGAACTTTTTGATTCTTGGTTGGCAGAACAAGATGAAAATGCTCAAGATAAAATCTT
AGCGTCTTTGCTTGTTTTGTCAGAACTGGGGCCAAATCTAGGCCGGCCTCATGTTGATACTATTAAAGAATCAAAATATC
CGAACATGAAAGAGATACGTGTGCAAGTTAAAGGTCATCCGATCCGTGGTTTCTTTGCATTTGATCCAGAACGTAAAGCC
ATTGTTTTGTGTGCTGGAGATAAGAAAGGGCTAAATGAAAAAGCCTTTTATAAAGAAATGATCAAGATTGCAGATGAACA
ATATGAGCAATATTTACGTGATAATTACGGAGATAAATAA

Antitoxin


Download         Length: 100 a.a.        Molecular weight: 10605.00 Da        Isoelectric Point: 6.6381

>AT144028 WP_006398012.1 NZ_CP046337:c52415-52116 [Burkholderia multivorans]
MSKISTRPWDSAEHLKTDDDMAEYFEACLQEGGDDPAFIAHALGVIARARGMSQVARDAGLSREGLYKALSHDGNPSFGT
ILKVIKALGLQLHGAKAHA

Download         Length: 300 bp

>AT144028 NZ_CP061643:73143-73442 [Acinetobacter seifertii]
ATGGCTAAATTAAACGATATAATTTCAAAACGCTCACCTGAAAGCCAACAACGCATCAAGAAAATGGCAAATCAAATGCT
ATTGGATATTAACCTATCGAACCTACGGGAAGAGTTAAAAATATCTCAAGCTGAAATTGCAAAAAATCTAGGTGTAAGCC
AAGCTGCTATTTCAAAACGTGAAAAATTAGGTAAAGATCTTAAGATTTCATCATTAAAAGAATATGTTGAAGCTATGGGT
GGCAAAGTAAGGTTAGATGTTGAGTTACCTAACGGAAAGCATGTTGCTATATCTATTTAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A0H3KJN2

Antitoxin

Source ID Structure
AlphaFold DB A0A0H3KTI5

References