Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type IV Classification (family/domain) cptAB/-
Location 2896335..2896976 Replicon chromosome
Accession NZ_CP045528
Organism Acinetobacter baumannii strain 6507

Toxin (Protein)


Gene name cptA Uniprot ID -
Locus tag DLI71_RS14080 Protein ID WP_000607077.1
Coordinates 2896587..2896976 (+) Length 130 a.a.

Antitoxin (Protein)


Gene name cptB Uniprot ID -
Locus tag DLI71_RS14075 Protein ID WP_011860336.1
Coordinates 2896335..2896580 (+) Length 82 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
DLI71_RS14055 2891839..2892846 + 1008 WP_000198631.1 DNA-directed RNA polymerase subunit alpha -
DLI71_RS14060 2892865..2893242 + 378 WP_001216380.1 50S ribosomal protein L17 -
DLI71_RS14065 2893424..2894914 + 1491 WP_000415125.1 NAD(P)/FAD-dependent oxidoreductase -
DLI71_RS14070 2894963..2896135 - 1173 WP_001190542.1 acyl-CoA dehydrogenase family protein -
DLI71_RS14075 2896335..2896580 + 246 WP_011860336.1 succinate dehydrogenase assembly factor 2 Antitoxin
DLI71_RS14080 2896587..2896976 + 390 WP_000607077.1 membrane protein Toxin
DLI71_RS14085 2897746..2898831 + 1086 WP_000049106.1 hypothetical protein -
DLI71_RS14090 2898909..2899475 + 567 WP_000651538.1 rhombosortase -
DLI71_RS14095 2899663..2901858 + 2196 WP_001158906.1 TRAP transporter large permease subunit -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.


Antitoxin

Flavinator of succinate dehydrogenase

(6-78)


Sequences

Toxin        


Download         Length: 130 a.a.        Molecular weight: 15552.88 Da        Isoelectric Point: 10.4313

>T142097 WP_000607077.1 NZ_CP045528:2896587-2896976 [Acinetobacter baumannii]
MINHLNFKLKYSRFSIIFQFFIGLSLAVLFYQLMPLLWWLVVISLLFISFIFFLKRPQLAQIAYLDKKLWSLAYKSQNTV
SRVKILKIIDCQIFIVIYFEGHKTLTSIIWFDQMSLAEWKKLKTLEKLY

Download         Length: 390 bp

>T142097 NZ_CP060397:1986664-1987026 [Synechococcus sp. CBW1004]
CTGATGCTGTTGCTCGACACCAACATCCTCATCGATGTGCTGCGCGGTGAAGCCGTGGCCCTGGCCTGGCTTGAGCAACA
GCGGCAGCCACGCATCAGCGTGATCACCTGGATCGAGGTGCTGGTGGGCTGCCGCGCAGGGGAGAGCAGCACGGTGGAGG
CCTGGCTGGAGACCTTCCCGCGTCTTCCGCTCGATGACGCCATCGCCGCTGAAACGGTGCGGCTGCGCCAGCGGCACGGC
CTGAAGGTGCCGGACGCCATCATCCTCGCCACCGCCCGCTGCGGAACCCTCACCCTGGCGACCCGCAACCGCCGCGATTT
TCCCATCCAACTCGGGGATGTGCTGCATCCCTACGAGCTCTGA

Antitoxin


Download         Length: 82 a.a.        Molecular weight: 9842.27 Da        Isoelectric Point: 4.9001

>AT142097 WP_011860336.1 NZ_CP045528:2896335-2896580 [Acinetobacter baumannii]
MTLEERKVIYRARRGLKEIDVYFDPYVKNYYLKADPAEKALFAELVEQEDPDLLDWFMEVSEPPRTELRDFIYKLKHYVH
G

Download         Length: 246 bp

>AT142097 NZ_CP060397:1986446-1986667 [Synechococcus sp. CBW1004]
GTGCGCACGATCGTGGATCTGCCCGATGCGGAACGCGCCCAGCTGGACGCGCTCTGTCGGCAGCGAGGGGTGTCGCGGGC
GGAGGCGTTGCGCCAGGCCCTGCGGCTTTGGTTGCGGCAGCAGACACCAAGCCACCATGCCGTGTTCGGCCTGTGGCGCG
ACCGGCCGGCAGGGAGCCTGGAGCTGCAGCAGGCGCTGCGGGAGGAGTGGAGCGAACGCTGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References