Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) EcnAB/-
Location 357831..358185 Replicon chromosome
Accession NZ_CP043567
Organism Stenotrophomonas acidaminiphila strain T0-18

Toxin (Protein)


Gene name EcnB Uniprot ID -
Locus tag F0P95_RS01895 Protein ID WP_056932450.1
Coordinates 357831..357965 (-) Length 45 a.a.

Antitoxin (Protein)


Gene name EcnA Uniprot ID -
Locus tag F0P95_RS01900 Protein ID WP_182335477.1
Coordinates 358033..358185 (-) Length 51 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
F0P95_RS01870 353674..354672 - 999 WP_182335472.1 MBL fold metallo-hydrolase -
F0P95_RS01875 354793..355092 - 300 WP_182335473.1 hypothetical protein -
F0P95_RS01880 355160..356452 - 1293 WP_182335474.1 tryptophan--tRNA ligase -
F0P95_RS01885 356562..357344 + 783 WP_182335475.1 hypothetical protein -
F0P95_RS01890 357417..357638 - 222 WP_182335476.1 CsbD family protein -
F0P95_RS01895 357831..357965 - 135 WP_056932450.1 entericidin A/B family lipoprotein Toxin
F0P95_RS01900 358033..358185 - 153 WP_182335477.1 entericidin A/B family lipoprotein Antitoxin
F0P95_RS01905 358313..359233 - 921 WP_182335478.1 arginase -
F0P95_RS01910 359449..360846 + 1398 WP_182335479.1 oxygen-independent coproporphyrinogen III oxidase -
F0P95_RS01915 360866..361621 + 756 WP_056932454.1 helix-turn-helix domain-containing protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Entericidin A/B

(23-42)

Antitoxin

Entericidin A/B

(23-42)


Sequences

Toxin        


Download         Length: 45 a.a.        Molecular weight: 4596.46 Da        Isoelectric Point: 10.2040

>T139031 WP_056932450.1 NZ_CP043567:c357965-357831 [Stenotrophomonas acidaminiphila]
MKRTVALMMLSLFSIAVLSGCNTVAGAGKDVQKAGEKVEDAAKR

Download         Length: 135 bp

>T139031 NZ_CP058342:185984-186091 [Escherichia coli]
ATGACGTTCGCAGAGCTGGGCATGGCCTTCTGGCATGATTTAGCGGCTCCGGTCATTGCTGGCATTCTTGCCAGTATGAT
CGTGAACTGGCTGAACAAGCGGAAGTAA

Antitoxin


Download         Length: 51 a.a.        Molecular weight: 5209.15 Da        Isoelectric Point: 8.2943

>AT139031 WP_182335477.1 NZ_CP043567:c358185-358033 [Stenotrophomonas acidaminiphila]
MKRVLMLALLGVFSAGMLSACNTVAGAGKDMQKAGEKVEHKAHDCSDGKC

Download         Length: 153 bp

>AT139031 NZ_CP058342:c185936-185870 [Escherichia coli]
GGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCT

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References