138998

Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type II Classification (family/domain) spoIISABC/SpoIISA-SpoIISB
Location 1223610..1224527 Replicon chromosome
Accession NZ_CP043546
Organism Bacillus velezensis strain SYP-B637

Toxin (Protein)


Gene name spoIISA Uniprot ID -
Locus tag F0M21_RS06495 Protein ID WP_012117368.1
Coordinates 1223781..1224527 (-) Length 249 a.a.

Antitoxin (Protein)


Gene name spoIISB Uniprot ID I2HQ14
Locus tag F0M21_RS06490 Protein ID WP_003154807.1
Coordinates 1223610..1223780 (-) Length 57 a.a.

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
F0M21_RS06445 1218744..1219256 + 513 WP_012117362.1 sigma-70 family RNA polymerase sigma factor -
F0M21_RS06450 1219369..1219590 + 222 Protein_1194 terminase -
F0M21_RS06455 1219999..1220466 + 468 WP_077411063.1 hypothetical protein -
F0M21_RS06460 1220479..1220850 + 372 WP_012117365.1 hypothetical protein -
F0M21_RS06465 1220855..1221052 + 198 WP_012117366.1 XkdX family protein -
F0M21_RS06470 1221109..1221870 + 762 WP_012117367.1 hypothetical protein -
F0M21_RS06475 1221922..1222185 + 264 WP_003154815.1 hemolysin XhlA family protein -
F0M21_RS06480 1222199..1222462 + 264 WP_003154813.1 phage holin -
F0M21_RS06485 1222476..1223354 + 879 WP_007407257.1 N-acetylmuramoyl-L-alanine amidase -
F0M21_RS06490 1223610..1223780 - 171 WP_003154807.1 type II toxin-antitoxin system SpoIISB family antitoxin Antitoxin
F0M21_RS06495 1223781..1224527 - 747 WP_012117368.1 type II toxin-antitoxin system SpoIISA family toxin Toxin
F0M21_RS06500 1224632..1225630 - 999 WP_007407255.1 inorganic phosphate transporter -
F0M21_RS06505 1225643..1226260 - 618 WP_003154804.1 DUF47 domain-containing protein -
F0M21_RS06510 1226546..1227862 - 1317 WP_007610842.1 amino acid permease -
F0M21_RS06515 1228185..1229135 + 951 WP_012117369.1 ring-cleaving dioxygenase -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Prophage - - 1211266..1281814 70548


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin

(3-239)

Antitoxin

(1-56)


Sequences


Toxin        


Download         Length: 249 a.a.        Molecular weight: 29119.61 Da        Isoelectric Point: 4.7003

>T138998 WP_012117368.1 NZ_CP043546:c1224527-1223781 [Bacillus velezensis]
MLLFFQIMVWTMAAALILYVYASWRYEAKVKEKMFAIRKTWYLLFVLGSMVYWTYDPESLFAEWRQYLIVAVCFALIDAF
IFLSAYIKKLAGNELETDTREILEENNEMLHSYLEKLKTYQYLLKNEPIHVYYGSTEAYAEGISRLLAAYAEKMNVTASL
CDYSAQADKDRLTEHMPDAADVQSRLNRKDVYYDQKGRLVLIPFTVQNRHYVIKLTSENLLTEFDYLLFTSLTSIYDLML
PIEEEGDG

Download         Length: 747 bp

>T138998 NZ_CP043546:c1224527-1223781 [Bacillus velezensis]
ATGCTTTTGTTTTTTCAGATTATGGTGTGGACGATGGCGGCCGCACTCATTTTATATGTGTACGCATCCTGGCGGTATGA
GGCAAAGGTAAAAGAAAAAATGTTTGCCATCCGTAAAACGTGGTATTTACTATTTGTACTGGGCTCCATGGTCTATTGGA
CATATGATCCCGAATCGCTCTTTGCCGAATGGAGACAATATTTGATTGTTGCCGTCTGCTTTGCCCTTATTGATGCGTTT
ATCTTTTTGAGCGCGTATATCAAAAAGCTCGCCGGCAATGAATTAGAGACGGATACGCGGGAAATTTTAGAAGAAAATAA
CGAAATGCTTCACTCCTATCTTGAAAAACTGAAAACCTATCAATATCTGTTGAAAAATGAACCGATCCATGTATATTATG
GAAGTACAGAAGCTTATGCGGAAGGCATCAGCAGACTGCTGGCCGCTTATGCCGAAAAAATGAATGTCACGGCTTCCTTG
TGCGACTATTCCGCACAAGCGGATAAGGACCGCTTGACAGAGCATATGCCTGATGCGGCGGACGTTCAGTCCCGTCTTAA
CCGTAAAGACGTCTACTATGATCAAAAAGGCAGGCTTGTGCTTATTCCGTTTACAGTTCAGAACCGCCATTACGTGATCA
AACTCACGTCGGAAAACCTGTTGACGGAATTCGATTATTTGCTTTTCACATCGCTAACGAGCATTTATGATTTAATGCTG
CCAATAGAAGAGGAAGGTGACGGTTAA

Antitoxin


Download         Length: 57 a.a.        Molecular weight: 6676.74 Da        Isoelectric Point: 10.9273

>AT138998 WP_003154807.1 NZ_CP043546:c1223780-1223610 [Bacillus velezensis]
MEQAFQNGQPEQRAKPFKMFKKRSMTSIASYQVSPHTARIFKENERLIDKYKQKKA

Download         Length: 171 bp

>AT138998 NZ_CP043546:c1223780-1223610 [Bacillus velezensis]
ATGGAGCAGGCATTTCAAAACGGGCAGCCGGAACAAAGAGCGAAACCGTTCAAAATGTTTAAAAAACGTTCAATGACAAG
TATCGCAAGTTACCAGGTCAGCCCTCATACCGCCAGAATTTTCAAAGAAAACGAGCGGCTGATTGACAAGTATAAACAAA
AAAAAGCTTGA

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure


Antitoxin

Source ID Structure
AlphaFold DB I2HQ14

References