138801

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) ataRT/DUF1778(antitoxin)
Location 2648417..2649151 Replicon chromosome
Accession NZ_CP043476
Organism Xanthomonas hyacinthi strain CFBP 1156

Toxin (Protein)


Gene name ataT Uniprot ID -
Locus tag FZ025_RS11740 Protein ID WP_208803627.1
Coordinates 2648693..2649151 (+) Length 153 a.a.

Antitoxin (Protein)


Gene name ataR Uniprot ID -
Locus tag FZ025_RS11735 Protein ID WP_046979679.1
Coordinates 2648417..2648689 (+) Length 91 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
FZ025_RS11715 2643595..2645304 + 1710 WP_208803800.1 ubiquinone-dependent pyruvate dehydrogenase -
FZ025_RS11720 2645488..2646474 - 987 WP_046979682.1 siroheme synthase -
FZ025_RS11725 2646568..2647140 + 573 WP_104558523.1 ANTAR domain-containing protein -
FZ025_RS11730 2647148..2648257 + 1110 WP_046979680.1 ABC transporter substrate-binding protein -
FZ025_RS11735 2648417..2648689 + 273 WP_046979679.1 DUF1778 domain-containing protein Antitoxin
FZ025_RS11740 2648693..2649151 + 459 WP_208803627.1 GNAT family N-acetyltransferase Toxin
FZ025_RS11750 2650113..2651282 + 1170 WP_208803802.1 NarK/NasA family nitrate transporter -
FZ025_RS11755 2651307..2653760 + 2454 WP_046979677.1 nitrite reductase large subunit NirB -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

GNAT domain

(21-128)

Antitoxin

Vibrio phage ICP1, Orf50

(15-83)


Sequences

Toxin        


Download         Length: 153 a.a.        Molecular weight: 16341.86 Da        Isoelectric Point: 10.9642

>T138801 WP_208803627.1 NZ_CP043476:2648693-2649151 [Xanthomonas hyacinthi]
MPLTAPGPLNGGHRLDAFVCSTPEPTRRLLERARQNQLSGASRCFVVCDGQQHVVGYYALAAGVVAHEDAPGRIRRNMPN
PVPVIVLGRLAVHVDWAGQGVGKGLLKDAVQRTLQACEQVGARALRCCVTPSMKQRRRSIPNTASSPRPSTT

Download         Length: 459 bp

>T138801 NZ_CP058226:c2766190-2764868 [Klebsiella pneumoniae]
ATGGCGACGCTTACCACCTGGATGAACAATGTGCGCGTGGGAACCTTAACCCGCCAGGCTAACGGGGCGCACAGTTTTCG
CTATGACGAAGAGTGGCTGCGCAGCCCGCGCGCCAGACCGCTCTCCCTCTCACTGCCGCTGCAGTATGGCAATATCACTG
CCGACGCGGTGTATCACTATTTTGATAACCTGCTGCCCGACAGCCCGCAGGTCCGCGACCGGATCGTCAGGCGCTATCAG
GCGCGCTCGAAGCAGCCGTTCGATCTGCTGGCCGAAGTCGGGCGGGATAGCGTAGGGGCGGTGACCCTCCTGCCGCCGGG
GGAAGAGGCGCACCTGGAAGGATTACGCTGGCAGACGCTGGACGAGGCGCAGCTCACCGCTTTGCTGACCGCTTACCAGT
CGGATATCCCCCTCGGGATGATTACCAGCCAGGACGATTTCCGTATCTCGGTGGCCGGCGCCCAGGAGAAAACGGCGCTG
CTGCGGATGGGCGAGCAGTGGTGTATTCCGCAGGGCGCCACGCCGACCACGCATATCATTAAGCTGCCCATCGGCGAGAT
CAAGCAGCCCAATGCGACGCTGGATCTGCGTGAAAGCGTGGATAATGAGTATCTGTGCCTGGCGCTGGCCAGAGAACTGG
GCCTGGCGGTGCCGGAAGCGGAGATCATCACCACCCCGCGGATCCGCGCCCTGGCGGTAACCCGCTTCGACCGGCGCTGG
GCGCAGGAGGGACGGGTGCTGCTGCGTCTGCCGCAGGAGGATCTGTGTCAGGCTTTTGGTCTTCCTTCAGCGATGAAATA
TGAGTCTGACGGCGGGCCGGGTATCGCCGCGATCATGACCTTTCTGCTGGGCTCGAGTGAAGCGCTGAAAGATCGCTATG
ACTTTATGAAGTTCATGGTCTTCCAGTGGCTGACGGGGGCGACGGACGGTCACGCAAAAAACTTCTCAATTTACCTGTTG
CCCGGCGGCAGCTACCGCTTAACACCGTTCTACGACATTATTTCGGCGTTTCCGGTGCTGGGCGGCACGGGACTGCATCT
GCGCGATCTGAAGCTGTCGATGGGGCTCAATGCCACAAAAGGGCGTAAAACAGAGATTAACGCCATCTATCCGCGTCATT
TTCTGGCGACGGCCAAAGCGGTGAACTTTCCCCTGGAGCAGATGCTGGCGATCCTCCAGGAGTTTGCCGGGCATGTGCCG
CAGGCAATCGAAAGCGCTCGCCGGACGCTGCCGGCGGACTTTTCCAGCCACGTCTGGCAGGCCATTACAGAGAACATGCT
GAAGCTGCACGCCCGCCTGCAGCAAGGGCTGCAGGCGCTATAG

Antitoxin


Download         Length: 91 a.a.        Molecular weight: 9862.33 Da        Isoelectric Point: 8.0582

>AT138801 WP_046979679.1 NZ_CP043476:2648417-2648689 [Xanthomonas hyacinthi]
MSAATSNVINFWAPAAKQALIDHAVEVSGMNRTAFILDAVCEKAHKVLADQTRFALSGQQLQRFNALLDAPLESNAAIRR
LLSTLAPWER

Download         Length: 273 bp

>AT138801 NZ_CP058226:c2766456-2766190 [Klebsiella pneumoniae]
ATGAATTCCCCGCAGATATACAGTCCCGTGCAGCTGGCCAATTACCTGAAGCTGCTGCGCCAGCAGAACCACTGGACCCA
GGATGCGCTGGCCAGGCGGATCGGCATTAAGCAGGCCACGCTGTCCAATTTTGAAAATCACCCCGACAAAACCACCTTAA
CCACGCTGTTTAAGATCCTCCAGTCGCTGGGGGTGGTGATGACGCTGAACGCCAAAGCTGCTGAGACGGCGCCGGCTCCC
GATAACAACACGGACCTTGACTGGTAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References