138658

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) EcnAB/-
Location 402677..403038 Replicon chromosome
Accession NZ_CP043403
Organism Xanthomonas oryzae pv. oryzicola strain GX01

Toxin (Protein)


Gene name EcnB Uniprot ID G7TLC7
Locus tag XOCgx_RS01865 Protein ID WP_011257368.1
Coordinates 402904..403038 (+) Length 45 a.a.

Antitoxin (Protein)


Gene name EcnA Uniprot ID G7TLC8
Locus tag XOCgx_RS01860 Protein ID WP_011407410.1
Coordinates 402677..402829 (+) Length 51 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
XOCgx_RS01835 399021..399704 - 684 WP_014505034.1 dTMP kinase -
XOCgx_RS01845 400184..400719 - 536 Protein_330 GTPase -
XOCgx_RS01850 400716..401324 - 609 WP_047340248.1 hypothetical protein -
XOCgx_RS01855 401646..402569 + 924 WP_014505030.1 arginase -
XOCgx_RS01860 402677..402829 + 153 WP_011407410.1 entericidin A/B family lipoprotein Antitoxin
XOCgx_RS01865 402904..403038 + 135 WP_011257368.1 entericidin A/B family lipoprotein Toxin
XOCgx_RS01870 403281..403490 + 210 WP_011407411.1 CsbD family protein -
XOCgx_RS01875 403659..404948 + 1290 WP_024711517.1 tryptophan--tRNA ligase -
XOCgx_RS01880 405001..406023 + 1023 WP_076342527.1 MBL fold metallo-hydrolase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Entericidin A/B

(23-42)

Antitoxin

Entericidin A/B

(23-42)


Sequences

Toxin        


Download         Length: 45 a.a.        Molecular weight: 4457.33 Da        Isoelectric Point: 10.2040

>T138658 WP_011257368.1 NZ_CP043403:402904-403038 [Xanthomonas oryzae pv. oryzicola]
MKRAIVLLVLSMLSVGLLSGCNTVAGAGKDVKGAGEKVEDAARK

Download         Length: 135 bp

>T138658 NZ_CP058192:c34530-34120 [Enterobacter hormaechei]
GTGAACAAAATGTATATGCTCGACACCAACATCTGCTCGTTCATCATGCGCGAGCAGCCGGAAGCCGTCCTGAAGCGTCT
GGAGCAGGCGGTGCTGCGGGGTCACCGCATTGTGGTTTCGGCCATCACCTGGGCCGAAGTGTCACTGGCATCACAGGAAG
CAGGACCAGCCGCACAGAAGCTGGCTGACGCCTTCGCTGCCCGCCTTGATGCCATCCTGCCCTGGGACCGTACCGCGGTG
GACGCGACCACGGAAATTAAGGTGGCGCTGCGCCTCGCCGGCACGCCGATCGGGCCGAACGACACGGCGATCGCCGGGCA
CGCCATCGCCGCCGGTGCCGTGCTGGTGACCAATAATGTGCGGGAATTTGAGCGGGTGCCGGGTCTTGTGCTGGAAGACT
GGGTAAGATAA

Antitoxin


Download         Length: 51 a.a.        Molecular weight: 5046.99 Da        Isoelectric Point: 8.7942

>AT138658 WP_011407410.1 NZ_CP043403:402677-402829 [Xanthomonas oryzae pv. oryzicola]
MKRLLTLMVLGLFSAGVMTGCNTVAGAGKDLQGAGGKVEKTAEKCSDGKC

Download         Length: 153 bp

>AT138658 NZ_CP058192:c34757-34527 [Enterobacter hormaechei]
ATGAGAACCGTATCCATTTTCAAAAACGGCAACAACCGCGCCATCCGCCTGCCCCGCGATCTGGATTTTGAGGGGGTGAG
CGAGCTGGAGATCGTCCGGGAAGGGGACAGCATTATTCTGCGTCCCGTCCGGCCGACCTGGGGCTCGTTCCTGGAGCTCG
AAAAAGCTGACCCGGACTTTATGGCTGAGCGCGGGGACGTTGTCAGCGACGAAGGACGGGTTAACCTGTGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A0C5UG40

Antitoxin

Source ID Structure
AlphaFold DB A0A0C5V759

References