Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/RelE(toxin)
Location 832314..832914 Replicon chromosome
Accession NZ_CP043056
Organism Dolichospermum sp. UHCC 0315A

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag BMF77_RS03840 Protein ID WP_148760782.1
Coordinates 832314..832667 (-) Length 118 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag BMF77_RS03845 Protein ID WP_148760784.1
Coordinates 832660..832914 (-) Length 85 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
BMF77_RS03820 828198..829490 - 1293 WP_148760778.1 ferredoxin:protochlorophyllide reductase (ATP-dependent) subunit N -
BMF77_RS03825 829834..830889 - 1056 WP_148760779.1 tRNA 2-thiouridine(34) synthase MnmA -
BMF77_RS03830 831101..831646 + 546 WP_148760780.1 photosystem II reaction center PsbP family protein -
BMF77_RS03835 831717..832310 + 594 WP_148760781.1 septum formation inhibitor Maf -
BMF77_RS03840 832314..832667 - 354 WP_148760782.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin
BMF77_RS03845 832660..832914 - 255 WP_148760784.1 hypothetical protein Antitoxin
BMF77_RS03850 833193..833957 + 765 WP_148760786.1 phycocyanobilin:ferredoxin oxidoreductase -
BMF77_RS03855 834478..835896 + 1419 WP_148760787.1 biotin/lipoyl-binding protein -
BMF77_RS03860 835966..837120 + 1155 WP_148760790.1 ABC transporter permease DevC -
BMF77_RS26485 837140..837274 - 135 Protein_760 hypothetical protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin HigB-2

(31-107)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 118 a.a.        Molecular weight: 13465.51 Da        Isoelectric Point: 7.9624

>T137026 WP_148760782.1 NZ_CP043056:c832667-832314 [Dolichospermum sp. UHCC 0315A]
MSDIPFIQVEVTLRFQRNLRKLAKKYLKIHNDIQPVIEQLQQGERLGDCIPKIGYEVFKLRVKNSDTQKGKSGGYRLIYY
VKTATAIILLTIYAKSEQADIAPDDIQSIISEYESED

Download         Length: 354 bp

>T137026 NZ_CP043056:c832667-832314 [Dolichospermum sp. UHCC 0315A]
ATGTCTGATATCCCATTTATTCAAGTAGAAGTAACACTAAGATTTCAGCGAAATTTACGTAAACTAGCCAAGAAATATCT
AAAGATTCACAATGATATTCAACCAGTTATAGAACAACTACAACAAGGAGAAAGACTCGGTGATTGCATTCCTAAAATCG
GTTATGAAGTTTTCAAATTGCGCGTCAAAAATAGCGACACTCAAAAAGGTAAAAGTGGTGGTTATCGTCTCATTTACTAT
GTCAAAACTGCAACAGCTATTATTTTGCTAACCATTTATGCAAAATCTGAACAAGCTGATATTGCCCCAGATGATATCCA
AAGTATTATTTCTGAATATGAATCTGAAGATTGA

Antitoxin


Download         Length: 85 a.a.        Molecular weight: 9548.87 Da        Isoelectric Point: 4.4258

>AT137026 WP_148760784.1 NZ_CP043056:c832914-832660 [Dolichospermum sp. UHCC 0315A]
MKAIKVMATVNQQGSLSLDKPLNIIQNSRVEVIILIPEAVEINEDHEQISSKEEIIQDFRQSWHEAMTGHTIPVSQLWEG
IENV

Download         Length: 255 bp

>AT137026 NZ_CP043056:c832914-832660 [Dolichospermum sp. UHCC 0315A]
ATGAAAGCAATTAAAGTCATGGCAACCGTTAATCAACAAGGAAGTTTGTCCTTAGATAAACCATTAAATATTATTCAAAA
TAGCCGTGTAGAAGTTATTATTCTTATTCCAGAAGCAGTAGAAATTAACGAAGATCATGAACAAATTTCATCTAAAGAAG
AAATAATTCAAGATTTTCGTCAGTCTTGGCACGAAGCAATGACTGGACACACAATTCCTGTTTCTCAACTTTGGGAAGGA
ATTGAAAATGTCTGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References