Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/RelE(toxin)
Location 832314..832914 Replicon chromosome
Accession NZ_CP043056
Organism Dolichospermum sp. UHCC 0315A

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag BMF77_RS03840 Protein ID WP_148760782.1
Coordinates 832314..832667 (-) Length 118 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag BMF77_RS03845 Protein ID WP_148760784.1
Coordinates 832660..832914 (-) Length 85 a.a.

Genomic Context

BMF77_RS03830BMF77_RS03835BMF77_RS03850BMF77_RS03855BMF77_RS03860BMF77_RS03820BMF77_RS03825BMF77_RS03840BMF77_RS03845BMF77_RS26485
Location: 831101..831646 (546 bp)
Type: Others
Protein ID: WP_148760780.1
Location: 831717..832310 (594 bp)
Type: Others
Protein ID: WP_148760781.1
Location: 833193..833957 (765 bp)
Type: Others
Protein ID: WP_148760786.1
Location: 834478..835896 (1419 bp)
Type: Others
Protein ID: WP_148760787.1
Location: 835966..837120 (1155 bp)
Type: Others
Protein ID: WP_148760790.1
Location: 828198..829490 (1293 bp)
Type: Others
Protein ID: WP_148760778.1
Location: 829834..830889 (1056 bp)
Type: Others
Protein ID: WP_148760779.1
Location: 832314..832667 (354 bp)
Type: Toxin
Protein ID: WP_148760782.1
Location: 832660..832914 (255 bp)
Type: Antitoxin
Protein ID: WP_148760784.1
Location: 837140..837274 (135 bp)
Type: Others
Protein ID: Protein_760
ToxinAntitoxinOther genes
Loading, please wait
Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
BMF77_RS03820828198..829490-1293WP_148760778.1ferredoxin:protochlorophyllide reductase (ATP-dependent) subunit N-
BMF77_RS03825829834..830889-1056WP_148760779.1tRNA 2-thiouridine(34) synthase MnmA-
BMF77_RS03830831101..831646+546WP_148760780.1photosystem II reaction center PsbP family protein-
BMF77_RS03835831717..832310+594WP_148760781.1septum formation inhibitor Maf-
BMF77_RS03840832314..832667-354WP_148760782.1type II toxin-antitoxin system RelE/ParE family toxinToxin
BMF77_RS03845832660..832914-255WP_148760784.1hypothetical proteinAntitoxin
BMF77_RS03850833193..833957+765WP_148760786.1phycocyanobilin:ferredoxin oxidoreductase-
BMF77_RS03855834478..835896+1419WP_148760787.1biotin/lipoyl-binding protein-
BMF77_RS03860835966..837120+1155WP_148760790.1ABC transporter permease DevC-
BMF77_RS26485837140..837274-135Protein_760hypothetical protein-

Associated MGEs

Loading, please wait
MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin HigB-2

(31-107)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 118 a.a.        Molecular weight: 13465.51 Da        Isoelectric Point: 7.9624

>T137026 WP_148760782.1 NZ_CP043056:c832667-832314 [Dolichospermum sp. UHCC 0315A]
MSDIPFIQVEVTLRFQRNLRKLAKKYLKIHNDIQPVIEQLQQGERLGDCIPKIGYEVFKLRVKNSDTQKGKSGGYRLIYY
VKTATAIILLTIYAKSEQADIAPDDIQSIISEYESED

Download         Length: 354 bp

>T137026 NZ_CP043056:c832667-832314 [Dolichospermum sp. UHCC 0315A]
ATGTCTGATATCCCATTTATTCAAGTAGAAGTAACACTAAGATTTCAGCGAAATTTACGTAAACTAGCCAAGAAATATCT
AAAGATTCACAATGATATTCAACCAGTTATAGAACAACTACAACAAGGAGAAAGACTCGGTGATTGCATTCCTAAAATCG
GTTATGAAGTTTTCAAATTGCGCGTCAAAAATAGCGACACTCAAAAAGGTAAAAGTGGTGGTTATCGTCTCATTTACTAT
GTCAAAACTGCAACAGCTATTATTTTGCTAACCATTTATGCAAAATCTGAACAAGCTGATATTGCCCCAGATGATATCCA
AAGTATTATTTCTGAATATGAATCTGAAGATTGA

Antitoxin


Download         Length: 85 a.a.        Molecular weight: 9548.87 Da        Isoelectric Point: 4.4258

>AT137026 WP_148760784.1 NZ_CP043056:c832914-832660 [Dolichospermum sp. UHCC 0315A]
MKAIKVMATVNQQGSLSLDKPLNIIQNSRVEVIILIPEAVEINEDHEQISSKEEIIQDFRQSWHEAMTGHTIPVSQLWEG
IENV

Download         Length: 255 bp

>AT137026 NZ_CP043056:c832914-832660 [Dolichospermum sp. UHCC 0315A]
ATGAAAGCAATTAAAGTCATGGCAACCGTTAATCAACAAGGAAGTTTGTCCTTAGATAAACCATTAAATATTATTCAAAA
TAGCCGTGTAGAAGTTATTATTCTTATTCCAGAAGCAGTAGAAATTAACGAAGATCATGAACAAATTTCATCTAAAGAAG
AAATAATTCAAGATTTTCGTCAGTCTTGGCACGAAGCAATGACTGGACACACAATTCCTGTTTCTCAACTTTGGGAAGGA
ATTGAAAATGTCTGA

Similar Proteins

Only experimentally validated proteins are listed.

Loading, please wait
Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
Loading, please wait
Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

Loading, please wait
Source
ID
Structure
No matching records found

Antitoxin

Loading, please wait
Source
ID
Structure
No matching records found

References