Detailed information of TA system TA136272

Bioinformatically predicted

Overview

TA module

• Type: II
• Classification (family/domain): relBE/YafQ-RelB
• Location: 4485139..4485685
• Replicon: chromosome
• Accession: NZ_CP042859
• Organism: Providencia sp. 1701011

Toxin (Protein)

• Gene name: relE
• Uniprot ID: -
• Locus tag: FVA69_RS20790
• Protein ID: WP_109912959.1
• Coordinates: 4485404..4485685 (+)
• Length: 94 a.a.

Antitoxin (Protein)

• Gene name: relB
• Uniprot ID: -
• Locus tag: FVA69_RS20785
• Protein ID: WP_102140619.1
• Coordinates: 4485139..4485423 (+)
• Length: 95 a.a.

Genomic Context

Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description

Associated MGEs

MGE detail	Similar MGEs	Relative position	MGE Type	Cargo ARG	Virulence gene	Coordinates	Length (bp)

Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.

Domains

Predicted by InterproScan

Toxin

• Toxin-antitoxin system, YafQ-like toxin (3-93)

Antitoxin

• RelB antitoxin/Antitoxin DinJ (9-84)

Sequences

Toxin

Protein

• Length: 94 a.a.
• Molecular weight: 10968.80 Da
• Isoelectric Point: 9.1315

>T136272 WP_109912959.1 NZ_CP042859:4485404-4485685 [Providencia sp. 1701011]
MLKIRVKSQFKKDLKKSLSDKKRNTQLLKELIDNHLCITGSVPAEYLPHPLKGNWRPCYEYHIQPDFLLIWDINYQTNEI
ILVRCGSHSELFG

Nucleotide

• Length: 282 bp

>T136272 NZ_CP042859:4485404-4485685 [Providencia sp. 1701011]
ATGCTGAAAATTCGCGTTAAATCCCAATTCAAAAAAGACTTAAAAAAGTCGTTATCTGACAAAAAAAGAAATACTCAGCT
ATTAAAAGAGTTAATCGATAACCACCTATGCATTACTGGCTCTGTTCCAGCAGAATATTTGCCTCATCCCTTAAAAGGAA
ACTGGAGACCTTGCTATGAATATCACATACAACCCGATTTTTTATTAATTTGGGATATAAACTACCAAACCAATGAAATC
ATATTAGTTCGCTGTGGTTCTCATTCTGAATTATTTGGCTAA

Antitoxin

Protein

• Length: 95 a.a.
• Molecular weight: 10420.71 Da
• Isoelectric Point: 4.6412

>AT136272 WP_102140619.1 NZ_CP042859:4485139-4485423 [Providencia sp. 1701011]
MASTQHKTDIVRARIEPKVRENAEAVLSELGISMSDAIRIFVKQISLRQAFPIELKTPNSITLEAINAPTTDETFDSAED
LFSQVSKSDAENSR

Nucleotide

• Length: 285 bp

>AT136272 NZ_CP042859:4485139-4485423 [Providencia sp. 1701011]
ATGGCCAGTACTCAACATAAAACAGATATTGTCAGAGCCAGAATTGAGCCTAAAGTCAGGGAAAATGCTGAAGCAGTGTT
ATCTGAATTAGGGATTAGCATGTCTGATGCTATTCGTATTTTCGTCAAGCAAATATCATTGCGACAAGCTTTTCCTATTG
AGTTAAAAACACCAAACTCAATTACATTAGAAGCTATTAATGCACCAACTACAGACGAAACATTTGACTCTGCTGAAGAT
TTATTTAGCCAAGTGAGCAAGTCCGATGCTGAAAATTCGCGTTAA