Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) /RES-TIGR02293
Location 1514992..1515908 Replicon chromosome
Accession NZ_CP042357
Organism Rahnella aquatilis strain H145

Toxin (Protein)


Gene name - Uniprot ID -
Locus tag FS594_RS07125 Protein ID WP_129952431.1
Coordinates 1514992..1515450 (-) Length 153 a.a.

Antitoxin (Protein)


Gene name - Uniprot ID -
Locus tag FS594_RS07130 Protein ID WP_129952432.1
Coordinates 1515447..1515908 (-) Length 154 a.a.

Genomic Context

FS594_RS07100FS594_RS07105FS594_RS07115FS594_RS07120FS594_RS07135FS594_RS07140FS594_RS07110FS594_RS07125FS594_RS07130FS594_RS07145
Location: 1510163..1511848 (1686 bp)
Type: Others
Protein ID: WP_235173859.1
Location: 1511939..1512397 (459 bp)
Type: Others
Protein ID: WP_129952428.1
Location: 1514074..1514508 (435 bp)
Type: Others
Protein ID: WP_217139064.1
Location: 1514512..1514964 (453 bp)
Type: Others
Protein ID: WP_129952430.1
Location: 1516259..1517146 (888 bp)
Type: Others
Protein ID: WP_129952433.1
Location: 1517332..1518927 (1596 bp)
Type: Others
Protein ID: WP_129952434.1
Location: 1513043..1513972 (930 bp)
Type: Others
Protein ID: WP_129991275.1
Location: 1514992..1515450 (459 bp)
Type: Toxin
Protein ID: WP_129952431.1
Location: 1515447..1515908 (462 bp)
Type: Antitoxin
Protein ID: WP_129952432.1
Location: 1519197..1519958 (762 bp)
Type: Others
Protein ID: WP_217139067.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
FS594_RS07100 (FS594_07120)1510163..1511848+1686WP_235173859.1choline dehydrogenase-
FS594_RS07105 (FS594_07125)1511939..1512397+459WP_129952428.1GNAT family N-acetyltransferase-
FS594_RS07110 (FS594_07130)1513043..1513972-930WP_129991275.1LysR family transcriptional regulator-
FS594_RS07115 (FS594_07135)1514074..1514508+435WP_217139064.1DMT family transporter-
FS594_RS07120 (FS594_07140)1514512..1514964+453WP_129952430.1DMT family transporter-
FS594_RS07125 (FS594_07145)1514992..1515450-459WP_129952431.1RES family NAD+ phosphorylaseToxin
FS594_RS07130 (FS594_07150)1515447..1515908-462WP_129952432.1DUF2384 domain-containing proteinAntitoxin
FS594_RS07135 (FS594_07155)1516259..1517146+888WP_129952433.1nucleoside-specific channel-forming protein Tsx-
FS594_RS07140 (FS594_07160)1517332..1518927+1596WP_129952434.1ABC-F family ATPase-
FS594_RS07145 (FS594_07165)1519197..1519958-762WP_217139067.1molybdopterin-synthase adenylyltransferase MoeB-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

RES domain

(2-135)

Antitoxin

Antitoxin Xre-like, helix-turn-helix domain

(34-95)


Sequences

Toxin        


Download         Length: 153 a.a.        Molecular weight: 17105.55 Da        Isoelectric Point: 4.4886

>T135572 WP_129952431.1 NZ_CP042357:c1515450-1514992 [Rahnella aquatilis]
MKLFRIVQTRHLATAWSGAGAQLYGGRWNPPGRPVVYVTTSISLAILEILVHVQNSMLMRAYTLLSIEVPEEWLDTLEVS
ELPADWRSASAPDSTQRQGDDWLEEGEYVGLKVPSVIVPSEYNVLLNPLHPTFGDLLSSVEREPMMFDPRLQ

Download         Length: 459 bp

>T135572 NZ_CP042357:c1515450-1514992 [Rahnella aquatilis]
TTGAAGCTGTTTCGTATCGTGCAGACCCGCCATCTGGCCACAGCCTGGTCGGGAGCCGGTGCGCAACTTTATGGCGGCCG
CTGGAATCCGCCGGGCAGACCGGTAGTCTATGTCACCACCAGCATCTCGCTGGCGATTCTGGAAATTCTGGTGCATGTGC
AAAACAGTATGCTGATGCGCGCCTATACTTTACTGAGTATTGAAGTACCGGAGGAATGGCTTGATACGCTTGAAGTTTCA
GAGCTGCCCGCCGACTGGCGCAGTGCATCAGCACCTGACAGCACACAACGTCAGGGTGATGACTGGCTGGAGGAAGGTGA
GTATGTCGGGCTGAAAGTGCCGTCAGTGATTGTGCCGTCAGAATACAACGTATTACTTAATCCGCTGCACCCGACGTTTG
GGGATTTGCTGAGTTCTGTCGAACGCGAACCGATGATGTTTGACCCGCGCCTTCAGTAA

Antitoxin


Download         Length: 154 a.a.        Molecular weight: 16475.77 Da        Isoelectric Point: 7.0196

>AT135572 WP_129952432.1 NZ_CP042357:c1515908-1515447 [Rahnella aquatilis]
MNSKITGLSSGSVQDSATPLWQSAGLPASSGISLINAIQKGFPVDSISRLNTELGWPKMVLLEIMGINERNYARRKAGNG
LLKSEESERVARLVRIVDAATDLFEGDRVSALEWFTRPAPALDGSRPLELLSSEAGAVEVSRLIGRLQHGVFS

Download         Length: 462 bp

>AT135572 NZ_CP042357:c1515908-1515447 [Rahnella aquatilis]
ATGAATTCAAAAATTACCGGGCTGTCTTCCGGCTCTGTGCAAGATTCTGCAACGCCGCTTTGGCAATCTGCGGGCCTGCC
CGCAAGCAGCGGAATCAGTTTGATAAATGCCATACAAAAAGGGTTTCCGGTTGATAGTATCAGCCGTCTTAATACTGAGC
TGGGATGGCCAAAAATGGTGTTACTGGAAATCATGGGCATTAATGAACGCAACTATGCGCGGCGTAAAGCCGGGAACGGC
TTGCTGAAAAGTGAAGAGAGTGAACGGGTGGCACGGCTGGTTCGCATCGTGGATGCCGCCACTGATTTGTTCGAAGGTGA
TCGTGTATCGGCGCTCGAATGGTTCACCCGCCCTGCTCCGGCACTCGATGGTTCACGTCCGCTGGAACTGCTGTCTTCTG
AAGCTGGCGCGGTAGAAGTCAGCCGTCTGATTGGTCGTCTCCAGCACGGTGTTTTCAGTTGA

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
No matching records found

Antitoxin

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Source
ID
Structure
No matching records found

References