134994

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) pmenTA/darT(toxin)
Location 2208850..2210624 Replicon chromosome
Accession NZ_CP042218
Organism Luteimonas granuli strain Gr-4

Toxin (Protein)


Gene name pmenT Uniprot ID -
Locus tag FPZ22_RS10180 Protein ID WP_144892679.1
Coordinates 2208850..2209503 (+) Length 218 a.a.

Antitoxin (Protein)


Gene name pmenA Uniprot ID -
Locus tag FPZ22_RS10185 Protein ID WP_144892681.1
Coordinates 2209500..2210624 (+) Length 375 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
FPZ22_RS10170 2204951..2208103 + 3153 WP_144892675.1 type I restriction endonuclease subunit R -
FPZ22_RS10175 2208090..2208857 + 768 WP_144892677.1 M48 family metallopeptidase -
FPZ22_RS10180 2208850..2209503 + 654 WP_144892679.1 DUF4433 domain-containing protein Toxin
FPZ22_RS10185 2209500..2210624 + 1125 WP_144892681.1 macro domain-containing protein Antitoxin
FPZ22_RS10190 2210570..2212411 - 1842 WP_144892683.1 DNA helicase RecQ -
FPZ22_RS10195 2212589..2213200 - 612 WP_144892685.1 DNA starvation/stationary phase protection protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

ssDNA thymidine ADP-ribosyltransferase, DarT

(16-216)

Antitoxin

Macro domain

(18-128)


Sequences

Toxin        


Download         Length: 218 a.a.        Molecular weight: 24992.49 Da        Isoelectric Point: 8.4732

>T134994 WP_144892679.1 NZ_CP042218:2208850-2209503 [Luteimonas granuli]
VAERYPNLNPDKALIWRIVHRDNLPWILDNGLHCGNGGVRAPGWISIGSPELIEKRASHPVPLPPGGTLNDYVPFYFTPF
SPMLRNIHTGWGGVRRRPNDEIVILVSSLHHVAAQGRPFLFTDSHAYYQWANFYADLADLGKIDWPLLQARDFRRDPDDP
AKFERYQAEALVHRHLPIDGLRGIVCYTDHLKQVLERQLQARNLDLPVFARTGWYFR

Download         Length: 654 bp

>T134994 NZ_CP042218:2208850-2209503 [Luteimonas granuli]
GTGGCTGAGCGCTATCCCAATCTCAATCCGGACAAAGCGCTGATCTGGCGCATCGTCCATCGTGACAACCTGCCGTGGAT
TCTGGACAACGGCCTTCACTGCGGTAACGGCGGCGTGCGGGCTCCGGGCTGGATCAGCATCGGGAGTCCGGAGCTGATCG
AGAAGCGCGCCAGCCATCCAGTACCACTGCCGCCGGGCGGGACCTTGAACGACTACGTGCCGTTCTACTTCACCCCGTTC
TCGCCGATGTTGCGCAATATCCATACGGGCTGGGGTGGCGTGCGGCGGCGGCCCAACGATGAGATCGTGATTCTCGTCTC
CAGCCTGCATCATGTCGCCGCGCAGGGCCGGCCTTTCCTGTTCACCGACAGTCACGCCTACTACCAGTGGGCAAACTTTT
ACGCCGACCTGGCTGACCTCGGCAAGATCGACTGGCCCTTGCTTCAGGCGAGGGATTTTCGCCGCGACCCGGACGACCCG
GCCAAGTTCGAGCGTTACCAGGCTGAGGCGCTGGTCCACCGGCACTTGCCGATCGACGGCTTGCGCGGCATCGTGTGCTA
CACGGACCATTTGAAGCAGGTCCTCGAGCGTCAACTCCAGGCCCGCAACCTGGACCTGCCGGTCTTCGCCCGTACCGGGT
GGTATTTCCGATGA

Antitoxin


Download         Length: 375 a.a.        Molecular weight: 41860.13 Da        Isoelectric Point: 9.2254

>AT134994 WP_144892681.1 NZ_CP042218:2209500-2210624 [Luteimonas granuli]
MITFTQGNLLEARAEALVNTVNTVGVMGKGIALMFKERFPENFRRYAAACKAKEVRVGRMFITEVNELGGPRWIINFPTK
QHWRGNSRMEWITEGLQDLRRFLVENQVKSVAIPPLGAGNGGLEWVQVRPHVETMLAGLETEILVFEPTGNYQNVAKRTG
VEKLTPARALIAELVRRYWVLGMECSLLEIQKLAWFLERNIEQAGLTPLELRFVPHKYGPYADRLRHLLDGLDGSYLHSV
KRIGDADPLDVIWFDDRRTSFVQAYLKSEAKDYAPALEATVALIDGFESPFGMELLASVDWLLVKDRVTPTVPAVREGLR
HWHGGPGAAERKGRLFDDRALGIALERLGPQPRRRSTQAASVAASATTSSTSSP

Download         Length: 1125 bp

>AT134994 NZ_CP042218:2209500-2210624 [Luteimonas granuli]
ATGATCACGTTCACTCAAGGCAATCTGCTGGAGGCCCGCGCCGAGGCGCTGGTTAATACCGTCAACACCGTGGGTGTGAT
GGGGAAGGGCATCGCGCTGATGTTCAAAGAGCGCTTCCCCGAGAACTTCCGTCGCTATGCCGCTGCGTGCAAGGCCAAGG
AGGTGCGGGTGGGTAGGATGTTCATCACCGAGGTCAACGAGCTGGGCGGTCCGCGCTGGATCATCAATTTTCCAACCAAG
CAGCATTGGCGCGGAAATTCGCGTATGGAGTGGATCACGGAGGGCCTGCAGGACCTGCGGCGGTTCCTGGTCGAGAATCA
GGTCAAGTCAGTCGCTATCCCGCCACTTGGGGCCGGTAACGGCGGCTTGGAATGGGTGCAGGTACGACCACACGTCGAAA
CAATGCTGGCTGGCCTGGAGACCGAGATCCTCGTGTTCGAGCCCACCGGCAATTACCAGAATGTGGCCAAGCGTACCGGG
GTCGAGAAGCTCACGCCGGCCCGCGCGCTGATCGCGGAGCTGGTGCGCCGCTATTGGGTGCTGGGCATGGAATGCAGCCT
GCTGGAGATCCAGAAGCTGGCCTGGTTCCTCGAACGCAATATCGAGCAGGCGGGCCTGACGCCCCTGGAGCTGCGCTTTG
TACCGCACAAGTACGGTCCTTACGCCGACCGTCTGCGACATCTGCTGGATGGCCTGGATGGCAGCTATCTGCACAGTGTC
AAGCGCATCGGTGATGCCGATCCACTGGACGTGATCTGGTTCGATGATAGACGCACAAGCTTCGTCCAGGCCTACCTGAA
GAGTGAGGCCAAGGATTACGCGCCGGCACTGGAAGCCACGGTGGCCTTGATCGACGGCTTCGAGTCGCCTTTCGGCATGG
AGCTTCTGGCGTCTGTGGACTGGCTGCTGGTGAAAGACCGCGTTACCCCGACCGTGCCTGCCGTACGCGAAGGCCTACGT
CACTGGCATGGCGGTCCCGGTGCGGCGGAGCGGAAGGGCAGGTTGTTCGATGATCGTGCCCTGGGTATTGCGCTGGAACG
GTTGGGCCCTCAGCCGCGCCGGCGCTCGACTCAGGCGGCGTCCGTTGCCGCTTCCGCAACCACGTCCAGCACCTCGTCCC
CGTAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References