Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | parDE/RelB(antitoxin) |
Location | 282375..282987 | Replicon | chromosome |
Accession | NZ_CP041999 | ||
Organism | Streptococcus agalactiae strain GBS11 |
Toxin (Protein)
Gene name | parE | Uniprot ID | Q8E1X3 |
Locus tag | FP509_RS01745 | Protein ID | WP_000384858.1 |
Coordinates | 282375..282710 (-) | Length | 112 a.a. |
Antitoxin (Protein)
Gene name | parD | Uniprot ID | Q8E1X2 |
Locus tag | FP509_RS01750 | Protein ID | WP_000255538.1 |
Coordinates | 282700..282987 (-) | Length | 96 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
FP509_RS01720 | 277573..278202 | + | 630 | WP_000591148.1 | hypothetical protein | - |
FP509_RS01725 | 278515..279390 | + | 876 | WP_000770113.1 | hypothetical protein | - |
FP509_RS01730 | 279426..279860 | + | 435 | WP_001220479.1 | hypothetical protein | - |
FP509_RS01735 | 280176..281432 | + | 1257 | WP_000122832.1 | plasmid recombination protein | - |
FP509_RS01740 | 281600..282070 | + | 471 | WP_000130119.1 | hypothetical protein | - |
FP509_RS01745 | 282375..282710 | - | 336 | WP_000384858.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
FP509_RS01750 | 282700..282987 | - | 288 | WP_000255538.1 | hypothetical protein | Antitoxin |
FP509_RS01755 | 283390..284610 | - | 1221 | WP_000156558.1 | tyrosine-type recombinase/integrase | - |
FP509_RS01760 | 284671..284931 | - | 261 | WP_001196072.1 | helix-turn-helix domain-containing protein | - |
FP509_RS01765 | 284943..285689 | - | 747 | WP_000966632.1 | hypothetical protein | - |
FP509_RS01770 | 285875..286666 | - | 792 | WP_001868842.1 | hypothetical protein | - |
FP509_RS01775 | 286647..287180 | - | 534 | WP_000680721.1 | hypothetical protein | - |
FP509_RS01780 | 287180..287518 | - | 339 | WP_001187920.1 | hypothetical protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | inside | Integrative and Conjugative Element | - | - | 180962..295015 | 114053 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 112 a.a. Molecular weight: 13264.04 Da Isoelectric Point: 5.2388
>T134820 WP_000384858.1 NZ_CP041999:c282710-282375 [Streptococcus agalactiae]
MDYKKYQIIYAPDVLEKLKEIRDYISQNYSSTSGQHKMEQIISDIEKLEVFPEVGFDADEKYGSKISKYHSTRGYTLSKD
YIVLYHIEEEENRVVIDYLLPTRSDYMKLFK
MDYKKYQIIYAPDVLEKLKEIRDYISQNYSSTSGQHKMEQIISDIEKLEVFPEVGFDADEKYGSKISKYHSTRGYTLSKD
YIVLYHIEEEENRVVIDYLLPTRSDYMKLFK
Download Length: 336 bp
>T134820 NZ_CP041999:c282710-282375 [Streptococcus agalactiae]
TTGGACTATAAGAAATATCAGATTATCTATGCTCCTGATGTTTTAGAGAAGTTAAAGGAAATTCGTGATTATATTTCTCA
AAACTATTCCTCGACATCAGGTCAGCACAAAATGGAGCAAATCATTAGTGACATAGAAAAACTCGAGGTTTTCCCTGAAG
TTGGTTTTGATGCCGATGAAAAATATGGTTCAAAAATCAGTAAGTACCACAGCACTAGAGGTTATACCTTAAGTAAAGAT
TATATTGTCCTATACCATATCGAGGAGGAAGAGAATAGGGTCGTTATTGATTACTTGCTTCCTACTCGAAGCGACTATAT
GAAATTGTTTAAATAG
TTGGACTATAAGAAATATCAGATTATCTATGCTCCTGATGTTTTAGAGAAGTTAAAGGAAATTCGTGATTATATTTCTCA
AAACTATTCCTCGACATCAGGTCAGCACAAAATGGAGCAAATCATTAGTGACATAGAAAAACTCGAGGTTTTCCCTGAAG
TTGGTTTTGATGCCGATGAAAAATATGGTTCAAAAATCAGTAAGTACCACAGCACTAGAGGTTATACCTTAAGTAAAGAT
TATATTGTCCTATACCATATCGAGGAGGAAGAGAATAGGGTCGTTATTGATTACTTGCTTCCTACTCGAAGCGACTATAT
GAAATTGTTTAAATAG
Antitoxin
Download Length: 96 a.a. Molecular weight: 10921.47 Da Isoelectric Point: 4.7271
>AT134820 WP_000255538.1 NZ_CP041999:c282987-282700 [Streptococcus agalactiae]
MVTAEKNRAVTFQANKELVSEAMTVLNKKNLTLSSALRLFLQNVVVTNEVDLLTEEELEKEKLFKQFQAEINKNIEDVRQ
GKFYTSEEVRSELGL
MVTAEKNRAVTFQANKELVSEAMTVLNKKNLTLSSALRLFLQNVVVTNEVDLLTEEELEKEKLFKQFQAEINKNIEDVRQ
GKFYTSEEVRSELGL
Download Length: 288 bp
>AT134820 NZ_CP041999:c282987-282700 [Streptococcus agalactiae]
ATGGTTACAGCAGAAAAAAATAGAGCTGTCACATTCCAAGCTAACAAAGAATTGGTAAGCGAAGCAATGACAGTATTAAA
CAAGAAAAATTTAACCTTATCATCTGCTTTAAGATTATTCCTTCAAAATGTCGTTGTCACAAATGAGGTTGACTTATTGA
CGGAAGAGGAGCTAGAGAAAGAAAAACTTTTCAAGCAATTTCAAGCTGAAATCAACAAAAATATTGAAGATGTTCGTCAA
GGGAAATTTTATACCTCTGAAGAAGTGAGGTCTGAACTTGGACTATAA
ATGGTTACAGCAGAAAAAAATAGAGCTGTCACATTCCAAGCTAACAAAGAATTGGTAAGCGAAGCAATGACAGTATTAAA
CAAGAAAAATTTAACCTTATCATCTGCTTTAAGATTATTCCTTCAAAATGTCGTTGTCACAAATGAGGTTGACTTATTGA
CGGAAGAGGAGCTAGAGAAAGAAAAACTTTTCAAGCAATTTCAAGCTGAAATCAACAAAAATATTGAAGATGTTCGTCAA
GGGAAATTTTATACCTCTGAAGAAGTGAGGTCTGAACTTGGACTATAA
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Structures
Toxin
Source | ID | Structure |
---|---|---|
AlphaFold DB | A0A0E1EF10 |
Antitoxin
Source | ID | Structure |
---|---|---|
AlphaFold DB | A0A0E1EFF9 |