134758

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) EcnAB/-
Location 4619921..4620286 Replicon chromosome
Accession NZ_CP041965
Organism Xanthomonas citri pv. glycines strain 2098

Toxin (Protein)


Gene name EcnB Uniprot ID A0A0B2CMD0
Locus tag FPL04_RS20255 Protein ID WP_016904515.1
Coordinates 4619921..4620055 (-) Length 45 a.a.

Antitoxin (Protein)


Gene name EcnA Uniprot ID V7Z8F2
Locus tag FPL04_RS20260 Protein ID WP_006451340.1
Coordinates 4620134..4620286 (-) Length 51 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
FPL04_RS20240 4616988..4617932 - 945 WP_102251090.1 MBL fold metallo-hydrolase -
FPL04_RS20245 4617991..4619280 - 1290 WP_154832831.1 tryptophan--tRNA ligase -
FPL04_RS20250 4619462..4619671 - 210 WP_016904514.1 CsbD family protein -
FPL04_RS20255 4619921..4620055 - 135 WP_016904515.1 entericidin A/B family lipoprotein Toxin
FPL04_RS20260 4620134..4620286 - 153 WP_006451340.1 entericidin A/B family lipoprotein Antitoxin
FPL04_RS20265 4620397..4621320 - 924 WP_046346094.1 arginase -
FPL04_RS20270 4621799..4622251 + 453 WP_054591235.1 roadblock/LC7 domain-containing protein -
FPL04_RS20275 4622316..4622675 + 360 WP_016904518.1 hypothetical protein -
FPL04_RS20280 4622770..4623687 + 918 WP_154832832.1 hypothetical protein -
FPL04_RS20285 4623684..4624226 + 543 WP_016904520.1 GTPase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Entericidin A/B

(23-42)

Antitoxin

Entericidin A/B

(23-42)


Sequences

Toxin        


Download         Length: 45 a.a.        Molecular weight: 4443.26 Da        Isoelectric Point: 9.3487

>T134758 WP_016904515.1 NZ_CP041965:c4620055-4619921 [Xanthomonas citri pv. glycines]
MKRAIVLLVLSVLSVGMLSGCNTVAGAGKDVQGAGEKVEDAARK

Download         Length: 135 bp

>T134758 NZ_CP041965:c4620055-4619921 [Xanthomonas citri pv. glycines]
ATGAAGCGTGCAATTGTGCTGCTGGTGCTGTCGGTGTTGTCGGTCGGTATGCTGTCGGGTTGCAACACCGTCGCAGGTGC
CGGCAAGGACGTGCAGGGCGCTGGCGAGAAGGTAGAAGACGCTGCGCGCAAGTAA

Antitoxin


Download         Length: 51 a.a.        Molecular weight: 5168.11 Da        Isoelectric Point: 8.2782

>AT134758 WP_006451340.1 NZ_CP041965:c4620286-4620134 [Xanthomonas citri pv. glycines]
MKRLLTLMVLGLFSAGVMTGCNTMAGAGKDMQGAGEKVEKKADNCSDGKC

Download         Length: 153 bp

>AT134758 NZ_CP041965:c4620286-4620134 [Xanthomonas citri pv. glycines]
ATGAAGCGACTGCTGACACTGATGGTACTGGGCCTGTTTTCGGCCGGCGTGATGACTGGCTGCAACACCATGGCCGGCGC
CGGCAAGGACATGCAGGGTGCAGGCGAGAAGGTCGAAAAGAAGGCCGACAATTGCAGCGACGGTAAGTGCTGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A0B2CMD0

Antitoxin

Source ID Structure
AlphaFold DB A0A2N7V051

References