Detailed information of TA system TA134093

Bioinformatically predicted

Overview

TA module

• Type: II
• Classification (family/domain): unclassified/Polyketide_cyc2(toxin)
• Location: 1026824..1027443
• Replicon: chromosome
• Accession: NZ_CP041868
• Organism: Mycobacterium tuberculosis strain 1-0030P6C4

Toxin (Protein)

• Gene name: novel[antitoxin]
• Uniprot ID: -
• Locus tag: FPJ38_RS04845
• Protein ID: WP_003404726.1
• Coordinates: 1027009..1027443 (+)
• Length: 145 a.a.

Antitoxin (Protein)

• Gene name: novel[toxin]
• Uniprot ID: G0TFQ5
• Locus tag: FPJ38_RS04840
• Protein ID: WP_003404724.1
• Coordinates: 1026824..1027003 (+)
• Length: 60 a.a.

Genomic Context

Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description
FPJ38_RS04825	1022297..1023877	+	1581	WP_192931667.1	serine hydrolase	-
FPJ38_RS04830	1023874..1026267	+	2394	WP_003898639.1	cation-translocating P-type ATPase	-
FPJ38_RS04835	1026540..1026698	+	159	WP_003404720.1	hypothetical protein	-
FPJ38_RS04840	1026824..1027003	+	180	WP_003404724.1	antitoxin	Antitoxin
FPJ38_RS04845	1027009..1027443	+	435	WP_003404726.1	SRPBCC family protein	Toxin
FPJ38_RS04850	1027541..1028314	+	774	WP_003404735.1	VOC family protein	-
FPJ38_RS04855	1028379..1028828	+	450	WP_003404738.1	hypothetical protein	-
FPJ38_RS04860	1028963..1029193	-	231	WP_003898642.1	hypothetical protein	-
FPJ38_RS04865	1029360..1030868	-	1509	WP_003404742.1	carotenoid oxygenase family protein	-
FPJ38_RS04870	1030870..1032108	-	1239	WP_003404744.1	acetyl-CoA acetyltransferase	-

Associated MGEs

MGE detail	Similar MGEs	Relative position	MGE Type	Cargo ARG	Virulence gene	Coordinates	Length (bp)

Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.

Domains

Predicted by InterproScan

Toxin

• Polyketide cyclase/dehydrase (1-142)

Antitoxin

• Antitoxin Rv0909/MT0933 (4-50)

Sequences

Toxin

Protein

• Length: 145 a.a.
• Molecular weight: 15754.47 Da
• Isoelectric Point: 9.7977

>T134093 WP_003404726.1 NZ_CP041868:1027009-1027443 [Mycobacterium tuberculosis]
MAKLSGSIDVPLPPEEAWMHASDLTRYREWLTIHKVWRSKLPEVLEKGTVVESYVEVKGMPNRIKWTIVRYKPPEGMTLN
GDGVGGVKVKLIAKVAPKEHGSVVSFDVHLGGPALLGPIGMIVAAALRADIRESLQNFVTVFAG

Nucleotide

• Length: 435 bp

>T134093 NZ_CP041868:1027009-1027443 [Mycobacterium tuberculosis]
ATGGCGAAACTGTCCGGATCCATCGACGTACCGCTGCCACCGGAGGAAGCCTGGATGCACGCCTCCGATCTGACTCGTTA
CCGAGAGTGGCTGACCATCCACAAGGTATGGCGCAGCAAGTTGCCCGAAGTGCTCGAGAAGGGCACGGTCGTCGAGTCGT
ATGTCGAGGTCAAGGGCATGCCCAACCGGATCAAGTGGACGATCGTGCGGTACAAACCCCCGGAGGGCATGACGCTCAAC
GGCGACGGTGTGGGTGGTGTCAAAGTCAAGCTGATCGCTAAGGTAGCGCCGAAAGAGCACGGCTCCGTCGTCAGCTTCGA
TGTGCACCTCGGCGGCCCGGCCCTGCTCGGGCCGATCGGCATGATCGTCGCCGCTGCATTGCGAGCCGACATCCGCGAAT
CGCTGCAGAACTTCGTCACGGTGTTTGCCGGCTGA

Antitoxin

Protein

• Length: 60 a.a.
• Molecular weight: 6394.06 Da
• Isoelectric Point: 4.3059

>AT134093 WP_003404724.1 NZ_CP041868:1026824-1027003 [Mycobacterium tuberculosis]
MGILDKVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKLQDAASNVVGMSDQQS

Nucleotide

• Length: 180 bp

>AT134093 NZ_CP041868:1026824-1027003 [Mycobacterium tuberculosis]
ATGGGAATCCTGGACAAGGTAAAGAACCTGCTGTCGCAGAACGCCGACAAGGTCGAGACGGTGATCAACAAAGCGGGCGA
ATTCGTCGACGAGCAGACGCAAGGCAATTATTCTGACGCCATCCACAAGCTGCAGGACGCGGCCAGCAACGTCGTCGGCA
TGAGCGACCAGCAGAGCTAG

Structures

Antitoxin

• AlphaFold DB: G0TFQ5