Detailed information of TA system TA132941

Bioinformatically predicted

Overview

TA module

• Type: II
• Classification (family/domain): Rv0298-Rv0299/-
• Location: 363864..364390
• Replicon: chromosome
• Accession: NZ_CP041849
• Organism: Mycobacterium tuberculosis strain 1-0123P6C4

Toxin (Protein)

• Gene name: Rv0299
• Uniprot ID: -
• Locus tag: FPJ59_RS01575
• Protein ID: WP_003401560.1
• Coordinates: 364088..364390 (+)
• Length: 101 a.a.

Antitoxin (Protein)

• Gene name: Rv0298
• Uniprot ID: -
• Locus tag: FPJ59_RS01570
• Protein ID: WP_031665974.1
• Coordinates: 363864..364091 (+)
• Length: 76 a.a.

Genomic Context

Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description
FPJ59_RS01555	359557..360360	-	804	WP_003401540.1	hypothetical protein	-
FPJ59_RS01560	360370..361767	-	1398	WP_003401544.1	sulfatase	-
FPJ59_RS01565	361946..363721	+	1776	WP_010886074.1	PE family protein	-
FPJ59_RS01570	363864..364091	+	228	WP_031665974.1	ribbon-helix-helix protein, CopG family	Antitoxin
FPJ59_RS01575	364088..364390	+	303	WP_003401560.1	toxin-antitoxin system toxin	Toxin
FPJ59_RS01580	364438..364659	+	222	WP_003401563.1	type II toxin-antitoxin system antitoxin VapB2	-
FPJ59_RS01585	364656..365081	+	426	WP_003401566.1	PIN domain nuclease	-
FPJ59_RS01590	365217..365849	+	633	WP_003401571.1	TetR/AcrR family transcriptional regulator	-
FPJ59_RS01595	365846..366754	+	909	WP_003900117.1	SDR family NAD(P)-dependent oxidoreductase	-

Associated MGEs

MGE detail	Similar MGEs	Relative position	MGE Type	Cargo ARG	Virulence gene	Coordinates	Length (bp)

Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.

Domains

Predicted by InterproScan

Toxin

No domain identified.

Antitoxin

• Ribbon-helix-helix protein, CopG (6-40)

Sequences

Toxin

Protein

• Length: 101 a.a.
• Molecular weight: 10442.16 Da
• Isoelectric Point: 4.9609

>T132941 WP_003401560.1 NZ_CP041849:364088-364390 [Mycobacterium tuberculosis]
MIAPGDIAPRRDSEHELYVAVLSNALHRAADTGRVITCPFIPGRVPEDLLAMVVAVEQPNGTLLPELVQWLHVAALGAPL
GNAGVAALREAASVVTALLC

Nucleotide

• Length: 303 bp

>T132941 NZ_CP041849:364088-364390 [Mycobacterium tuberculosis]
TTGATCGCTCCCGGCGACATCGCGCCGCGCCGCGACAGTGAACACGAGCTCTACGTCGCCGTCTTGTCCAACGCGCTCCA
TCGGGCCGCGGACACCGGACGGGTGATCACCTGCCCATTCATTCCGGGCCGGGTCCCCGAGGATCTCTTGGCGATGGTGG
TGGCGGTCGAGCAACCCAACGGCACGCTGCTGCCGGAACTCGTGCAGTGGCTTCATGTTGCCGCGCTCGGTGCGCCACTC
GGCAACGCGGGCGTGGCCGCCCTACGCGAGGCTGCCTCGGTCGTGACAGCTCTGCTCTGTTAG

Antitoxin

Protein

• Length: 76 a.a.
• Molecular weight: 8148.24 Da
• Isoelectric Point: 7.0084

>AT132941 WP_031665974.1 NZ_CP041849:363864-364091 [Mycobacterium tuberculosis]
MTKEKISVTVDAAVLAAIDADARAAGLNRSEMIEQALRNEHMRVALRDYTAKTVPALDIDAYAQRVYQANRAAGS

Nucleotide

• Length: 228 bp

>AT132941 NZ_CP041849:363864-364091 [Mycobacterium tuberculosis]
ATGACGAAAGAGAAGATCTCCGTGACGGTGGACGCGGCCGTCCTCGCGGCGATCGACGCGGACGCCAGGGCGGCGGGTTT
GAATCGGTCGGAAATGATTGAGCAGGCACTGCGCAACGAGCACATGCGTGTCGCTCTGCGCGATTACACGGCTAAAACCG
TACCGGCGTTGGACATCGATGCCTACGCACAGCGGGTGTACCAGGCGAACCGAGCGGCCGGAAGTTGA