Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mazEF/MazF(toxin)
Location 3122298..3122868 Replicon chromosome
Accession NZ_CP041837
Organism Mycobacterium tuberculosis strain 2-0029P6C4

Toxin (Protein)


Gene name mazF Uniprot ID P71650
Locus tag FPJ71_RS14680 Protein ID WP_003414166.1
Coordinates 3122298..3122654 (-) Length 119 a.a.

Antitoxin (Protein)


Gene name mazE Uniprot ID P0CL61
Locus tag FPJ71_RS14685 Protein ID WP_003901465.1
Coordinates 3122638..3122868 (-) Length 77 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
FPJ71_RS14660 3117750..3119438 - 1689 WP_003414155.1 alpha/beta hydrolase family protein -
FPJ71_RS14665 3119442..3119768 - 327 WP_003414157.1 hypothetical protein -
FPJ71_RS14670 3119941..3120528 + 588 WP_003914429.1 DUF3558 family protein -
FPJ71_RS14675 3120547..3122196 + 1650 WP_003899485.1 CocE/NonD family hydrolase -
FPJ71_RS14680 3122298..3122654 - 357 WP_003414166.1 type II toxin-antitoxin system toxin endoribonuclease MazF9 Toxin
FPJ71_RS14685 3122638..3122868 - 231 WP_003901465.1 antitoxin MazE Antitoxin
FPJ71_RS14690 3122911..3123954 - 1044 WP_003414172.1 DUF2293 domain-containing protein -
FPJ71_RS14695 3124145..3124420 + 276 WP_003911993.1 DUF1778 domain-containing protein -
FPJ71_RS14700 3124596..3124850 - 255 WP_003917684.1 hypothetical protein -
FPJ71_RS14705 3124998..3125402 + 405 WP_009938577.1 hypothetical protein -
FPJ71_RS14710 3125399..3125590 + 192 WP_003414184.1 hypothetical protein -
FPJ71_RS14715 3125654..3126943 + 1290 Protein_2904 transposase family protein -
FPJ71_RS14720 3127177..3127434 + 258 WP_003899489.1 hypothetical protein -
FPJ71_RS14725 3127539..3127850 + 312 WP_003414190.1 hypothetical protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

mRNA interferase PemK-like

(3-113)

Antitoxin

Ribbon-helix-helix protein, CopG

(3-29)


Sequences

Toxin        


Download         Length: 119 a.a.        Molecular weight: 12858.73 Da        Isoelectric Point: 9.1962

>T132264 WP_003414166.1 NZ_CP041837:c3122654-3122298 [Mycobacterium tuberculosis]
VMRRGEIWQVDLDPARGSEANNQRPAVVVSNDRANATATRLGRGVITVVPVTSNIAKVYPFQVLLSATTTGLQVDCKAQA
EQIRSIATERLLRPIGRVSAAELAQLDEALKLHLDLWS

Download         Length: 357 bp

>T132264 NZ_CP041837:c3122654-3122298 [Mycobacterium tuberculosis]
GTGATGCGCCGCGGTGAGATTTGGCAGGTCGATCTCGACCCCGCTCGAGGTAGCGAAGCGAACAACCAGCGCCCCGCCGT
CGTCGTCAGCAACGACCGGGCCAACGCGACCGCCACGCGTCTTGGGCGCGGCGTCATCACCGTCGTGCCGGTGACGAGCA
ACATCGCCAAGGTCTATCCGTTTCAGGTGTTGTTGTCGGCCACCACTACTGGTCTCCAGGTCGACTGCAAGGCGCAGGCC
GAGCAAATCAGATCGATTGCTACCGAGCGGTTGCTCCGGCCAATCGGCCGAGTTTCAGCCGCCGAACTTGCCCAGCTCGA
TGAGGCTTTGAAACTGCATCTCGACTTATGGTCGTAG

Antitoxin


Download         Length: 77 a.a.        Molecular weight: 8231.01 Da        Isoelectric Point: 4.1809

>AT132264 WP_003901465.1 NZ_CP041837:c3122868-3122638 [Mycobacterium tuberculosis]
VKLSVSLSDDDVAILDAYVKRAGLPSRSAGLQHAIRVLRYPTLEDDYANAWQEWSAAGDTDAWEQTVGDGVGDAPR

Download         Length: 231 bp

>AT132264 NZ_CP041837:c3122868-3122638 [Mycobacterium tuberculosis]
GTGAAGTTGAGCGTGAGCCTGTCCGATGACGACGTCGCGATCCTGGACGCATATGTGAAACGAGCGGGATTACCATCCCG
CTCCGCCGGCCTGCAGCATGCGATCCGCGTGCTTCGCTACCCCACGCTCGAAGATGACTATGCCAACGCATGGCAAGAAT
GGTCGGCAGCCGGCGACACGGACGCGTGGGAGCAGACCGTCGGCGACGGAGTCGGTGATGCGCCGCGGTGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
PDB 6L2A
PDB 5HJZ
PDB 6KYT
PDB 6L29
PDB 7DU5
PDB 6KYS

Antitoxin

Source ID Structure
PDB 7DU5
PDB 6KYT
AlphaFold DB A0A7U4FBW3

References