130628

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mazEF/MazF(toxin)
Location 3106405..3106975 Replicon chromosome
Accession NZ_CP041810
Organism Mycobacterium tuberculosis strain SEA08162P6C4

Toxin (Protein)


Gene name mazF Uniprot ID P71650
Locus tag FPJ99_RS14640 Protein ID WP_003414166.1
Coordinates 3106405..3106761 (-) Length 119 a.a.

Antitoxin (Protein)


Gene name mazE Uniprot ID P0CL61
Locus tag FPJ99_RS14645 Protein ID WP_003901465.1
Coordinates 3106745..3106975 (-) Length 77 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
FPJ99_RS14620 3101857..3103545 - 1689 WP_003414155.1 alpha/beta hydrolase family protein -
FPJ99_RS14625 3103549..3103875 - 327 WP_003414157.1 hypothetical protein -
FPJ99_RS14630 3104048..3104635 + 588 WP_003914429.1 DUF3558 family protein -
FPJ99_RS14635 3104654..3106303 + 1650 WP_003899485.1 CocE/NonD family hydrolase -
FPJ99_RS14640 3106405..3106761 - 357 WP_003414166.1 type II toxin-antitoxin system toxin endoribonuclease MazF9 Toxin
FPJ99_RS14645 3106745..3106975 - 231 WP_003901465.1 antitoxin MazE Antitoxin
FPJ99_RS14650 3107018..3108061 - 1044 WP_003414172.1 DUF2293 domain-containing protein -
FPJ99_RS14655 3108252..3108527 + 276 WP_003911993.1 DUF1778 domain-containing protein -
FPJ99_RS14660 3108703..3108957 - 255 WP_003917684.1 hypothetical protein -
FPJ99_RS14665 3109105..3109509 + 405 WP_009938577.1 hypothetical protein -
FPJ99_RS14670 3109506..3109697 + 192 WP_003414184.1 hypothetical protein -
FPJ99_RS14675 3109761..3111050 + 1290 Protein_2896 transposase family protein -
FPJ99_RS14680 3111284..3111541 + 258 WP_003899489.1 hypothetical protein -
FPJ99_RS14685 3111646..3111957 + 312 WP_003414190.1 hypothetical protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

mRNA interferase PemK-like

(3-113)

Antitoxin

Ribbon-helix-helix protein, CopG

(3-29)


Sequences

Toxin        


Download         Length: 119 a.a.        Molecular weight: 12858.73 Da        Isoelectric Point: 9.1962

>T130628 WP_003414166.1 NZ_CP041810:c3106761-3106405 [Mycobacterium tuberculosis]
VMRRGEIWQVDLDPARGSEANNQRPAVVVSNDRANATATRLGRGVITVVPVTSNIAKVYPFQVLLSATTTGLQVDCKAQA
EQIRSIATERLLRPIGRVSAAELAQLDEALKLHLDLWS

Download         Length: 357 bp

>T130628 NZ_CP041810:c3106761-3106405 [Mycobacterium tuberculosis]
GTGATGCGCCGCGGTGAGATTTGGCAGGTCGATCTCGACCCCGCTCGAGGTAGCGAAGCGAACAACCAGCGCCCCGCCGT
CGTCGTCAGCAACGACCGGGCCAACGCGACCGCCACGCGTCTTGGGCGCGGCGTCATCACCGTCGTGCCGGTGACGAGCA
ACATCGCCAAGGTCTATCCGTTTCAGGTGTTGTTGTCGGCCACCACTACTGGTCTCCAGGTCGACTGCAAGGCGCAGGCC
GAGCAAATCAGATCGATTGCTACCGAGCGGTTGCTCCGGCCAATCGGCCGAGTTTCAGCCGCCGAACTTGCCCAGCTCGA
TGAGGCTTTGAAACTGCATCTCGACTTATGGTCGTAG

Antitoxin


Download         Length: 77 a.a.        Molecular weight: 8231.01 Da        Isoelectric Point: 4.1809

>AT130628 WP_003901465.1 NZ_CP041810:c3106975-3106745 [Mycobacterium tuberculosis]
VKLSVSLSDDDVAILDAYVKRAGLPSRSAGLQHAIRVLRYPTLEDDYANAWQEWSAAGDTDAWEQTVGDGVGDAPR

Download         Length: 231 bp

>AT130628 NZ_CP041810:c3106975-3106745 [Mycobacterium tuberculosis]
GTGAAGTTGAGCGTGAGCCTGTCCGATGACGACGTCGCGATCCTGGACGCATATGTGAAACGAGCGGGATTACCATCCCG
CTCCGCCGGCCTGCAGCATGCGATCCGCGTGCTTCGCTACCCCACGCTCGAAGATGACTATGCCAACGCATGGCAAGAAT
GGTCGGCAGCCGGCGACACGGACGCGTGGGAGCAGACCGTCGGCGACGGAGTCGGTGATGCGCCGCGGTGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
PDB 6L2A
PDB 5HJZ
PDB 6KYT
PDB 6L29
PDB 7DU5
PDB 6KYS

Antitoxin

Source ID Structure
AlphaFold DB A0A7U4FBW3

References