129791

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/Txe-YefM
Location 3786237..3786766 Replicon chromosome
Accession NZ_CP041796
Organism Mycobacterium tuberculosis strain SEA14318P6C4

Toxin (Protein)


Gene name relE Uniprot ID G0TI95
Locus tag FPK13_RS17560 Protein ID WP_003417760.1
Coordinates 3786509..3786766 (+) Length 86 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID G0TI94
Locus tag FPK13_RS17555 Protein ID WP_003417757.1
Coordinates 3786237..3786512 (+) Length 92 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
FPK13_RS17535 3783035..3784472 - 1438 Protein_3463 FAD-binding oxidoreductase -
FPK13_RS17540 3784575..3784964 + 390 WP_003417745.1 DUF732 domain-containing protein -
FPK13_RS17545 3784978..3785271 - 294 WP_003417749.1 DUF3017 domain-containing protein -
FPK13_RS17550 3785268..3786113 - 846 WP_003905054.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase -
FPK13_RS17555 3786237..3786512 + 276 WP_003417757.1 type II toxin-antitoxin system antitoxin RelJ Antitoxin
FPK13_RS17560 3786509..3786766 + 258 WP_003417760.1 Txe/YoeB family addiction module toxin Toxin
FPK13_RS17565 3786808..3787998 + 1191 WP_014588794.1 NADH:flavin oxidoreductase -
FPK13_RS17570 3788115..3788483 + 369 WP_003417765.1 FHA domain-containing protein -
FPK13_RS17575 3788480..3789031 - 552 WP_003417767.1 pentapeptide repeat protein MfpA -
FPK13_RS17580 3789038..3789619 - 582 WP_003417769.1 ATP/GTP-binding protein -
FPK13_RS17585 3789600..3789968 - 369 WP_003417772.1 DUF742 domain-containing protein -
FPK13_RS17590 3789946..3790338 - 393 WP_003417776.1 roadblock/LC7 domain-containing protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin YoeB

(6-85)

Antitoxin

Type II toxin-antitoxin system, antitoxin Phd/YefM

(2-72)


Sequences

Toxin        


Download         Length: 86 a.a.        Molecular weight: 10070.30 Da        Isoelectric Point: 6.4693

>T129791 WP_003417760.1 NZ_CP041796:3786509-3786766 [Mycobacterium tuberculosis]
VRSVNFDPDAWEDFLFWLAADRKTARRITRLIGEIQRDPFSGIGKPEPLQGELSGYWSRRIDDEHRLVYRAGDDEVTMLK
ARYHY

Download         Length: 258 bp

>T129791 NZ_CP041796:3786509-3786766 [Mycobacterium tuberculosis]
GTGAGAAGCGTCAACTTCGATCCCGATGCCTGGGAGGACTTCTTGTTCTGGCTGGCCGCTGATCGCAAAACGGCCCGTCG
GATCACCCGGTTGATCGGAGAAATTCAGCGTGATCCGTTCAGCGGGATCGGCAAACCCGAGCCGCTCCAAGGTGAGTTGT
CGGGATACTGGTCGCGCCGGATCGACGACGAACACCGGCTGGTGTATCGAGCGGGCGACGACGAAGTCACGATGCTGAAG
GCCCGATACCACTACTGA

Antitoxin


Download         Length: 92 a.a.        Molecular weight: 10194.35 Da        Isoelectric Point: 4.6652

>AT129791 WP_003417757.1 NZ_CP041796:3786237-3786512 [Mycobacterium tuberculosis]
MSISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENARRLMEAVARDKAGHSAFTKSV
DELREMAGGEE

Download         Length: 276 bp

>AT129791 NZ_CP041796:3786237-3786512 [Mycobacterium tuberculosis]
ATGAGCATCAGTGCGAGCGAGGCGAGGCAGCGCCTGTTTCCACTCATCGAACAGGTCAATACCGATCACCAGCCGGTGCG
GATCACCTCCCGGGCCGGCGATGCGGTGCTGATGTCCGCCGACGACTACGACGCGTGGCAGGAAACGGTCTATCTGCTGC
GCTCACCGGAGAACGCCAGGCGGTTGATGGAAGCGGTTGCCCGGGATAAGGCTGGGCACTCGGCTTTCACCAAGTCTGTA
GATGAGCTGCGGGAGATGGCCGGCGGCGAGGAGTGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
PDB 3OEI

Antitoxin

Source ID Structure
AlphaFold DB G0TI94

References