Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mosAT/AbiEii-AbiEi
Location 442079..443790 Replicon chromosome
Accession NZ_CP041661
Organism Catenovulum sediminis strain WS1-A

Toxin (Protein)


Gene name mosT Uniprot ID -
Locus tag FNT16_RS19250 Protein ID WP_143873566.1
Coordinates 442079..443011 (-) Length 311 a.a.

Antitoxin (Protein)


Gene name mosA Uniprot ID -
Locus tag FNT16_RS19255 Protein ID WP_143873569.1
Coordinates 443011..443790 (-) Length 260 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
FNT16_RS19235 437580..438536 + 957 WP_143873559.1 ATP-binding protein -
FNT16_RS19240 439155..439952 + 798 WP_143873561.1 hypothetical protein -
FNT16_RS20475 439977..440213 - 237 WP_185976769.1 hypothetical protein -
FNT16_RS19245 440648..441871 - 1224 WP_143873564.1 tyrosine-type recombinase/integrase -
FNT16_RS19250 442079..443011 - 933 WP_143873566.1 nucleotidyl transferase AbiEii/AbiGii toxin family protein Toxin
FNT16_RS19255 443011..443790 - 780 WP_143873569.1 type IV toxin-antitoxin system AbiEi family antitoxin Antitoxin
FNT16_RS19260 444121..444570 - 450 WP_143873570.1 hypothetical protein -
FNT16_RS19265 444572..444835 - 264 WP_143873573.1 hypothetical protein -
FNT16_RS19270 445034..445942 + 909 WP_143873576.1 DUF2384 domain-containing protein -
FNT16_RS19275 446276..447796 - 1521 WP_143873578.1 hypothetical protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Nucleotidyl transferase AbiEii toxin, Type IV TA system

(18-266)

Antitoxin

Transcriptional regulator AbiEi antitoxin, N-terminal domain

(1-97)


Sequences

Toxin        


Download         Length: 311 a.a.        Molecular weight: 35338.95 Da        Isoelectric Point: 6.0575

>T128958 WP_143873566.1 NZ_CP041661:c443011-442079 [Catenovulum sediminis]
MDKSSSYYKQVSLLIKMLPVVATEPVFALKGGTAINLFIRNFPRLSVDIDLAYLPLEPRDEALANVRAALKRITDRINAQ
PKINAIFQDNRSDELRIVVTSELATIKIEISPVARGTLHEPQLLAVQESIEDEFGYAEVPVVSLPDLYGGKLCAAMDRQH
PRDLFDVRLLLQNEGITREIFIGFLTYVLGHPRPINEVLLPNWQPLKDKFNSEFSGMTIDHVKLQDLEDTRQAMLDALKE
QFTEQDRDFLISFKKGIPDWTLFDYPNVADLPAVRWKLLNLQKLMGSNKNKHDKLILKLDQVMSSWLKVG

Download         Length: 933 bp

>T128958 NZ_CP041661:c443011-442079 [Catenovulum sediminis]
ATGGATAAAAGTAGCTCGTACTACAAGCAGGTTTCTTTATTGATAAAAATGTTGCCCGTTGTCGCGACTGAGCCAGTATT
TGCGCTAAAAGGCGGGACAGCAATCAATTTATTTATACGGAACTTTCCACGTTTATCGGTTGATATTGATTTGGCTTATT
TGCCGTTAGAACCAAGAGATGAAGCTTTAGCTAATGTGCGAGCTGCGTTAAAGCGAATTACCGACAGAATAAATGCTCAG
CCGAAAATAAATGCTATCTTTCAGGACAACCGAAGTGATGAATTGCGCATTGTTGTTACTTCTGAATTGGCGACGATTAA
AATTGAAATTTCTCCCGTAGCGAGAGGTACTTTGCACGAGCCTCAGCTTTTAGCTGTTCAGGAGTCGATTGAAGACGAAT
TCGGTTATGCAGAAGTCCCCGTGGTCAGTTTACCTGATTTATATGGCGGTAAATTATGTGCGGCTATGGATCGACAACAT
CCAAGAGATTTATTTGATGTTCGGCTTTTATTGCAGAATGAAGGGATCACAAGAGAAATTTTTATCGGTTTTTTGACTTA
TGTTTTGGGGCACCCTCGTCCAATAAATGAAGTTTTGTTACCTAATTGGCAACCACTAAAAGATAAGTTTAATTCTGAAT
TTTCGGGTATGACGATAGATCACGTTAAATTACAGGATTTAGAAGATACTCGCCAAGCCATGCTTGACGCATTAAAAGAG
CAGTTTACAGAGCAAGATAGAGACTTTTTAATTTCCTTTAAAAAAGGAATCCCTGACTGGACTTTGTTTGATTACCCAAA
TGTTGCTGATTTACCAGCAGTACGATGGAAGCTGCTAAATTTGCAAAAGCTAATGGGCAGCAACAAAAATAAACATGATA
AATTAATACTGAAATTGGATCAGGTAATGAGTAGTTGGTTAAAGGTAGGCTAA

Antitoxin


Download         Length: 260 a.a.        Molecular weight: 29440.69 Da        Isoelectric Point: 9.6653

>AT128958 WP_143873569.1 NZ_CP041661:c443790-443011 [Catenovulum sediminis]
MSSKLNWLVSHTSPGSLVLQKWLTENSVSHSLAQKYATSGWLCKIASGVYYRPSADSLTKPGWIEAMYAIETQLKLPVHL
AGLTSLTYQGLNHYVQVANAQVWLGVERKQSLPKWFHEFNGQKWLYCSNSKLTKADSDYKTIEIKNKLITASTPELAAYE
IVEAIGKHITFEHVAELFQGLVNLSPRKVQSILARSVSIQTNRVFLFLSHYYQHPWVKRLDESLINLGAGKRQVVKNGYY
DERYQITVPHSLPKSEESN

Download         Length: 780 bp

>AT128958 NZ_CP041661:c443790-443011 [Catenovulum sediminis]
ATGTCATCAAAATTAAACTGGCTGGTGTCACACACTTCGCCAGGTTCATTGGTTTTACAAAAATGGTTAACTGAAAACAG
TGTGAGCCATTCATTAGCTCAAAAATATGCTACTTCTGGTTGGTTATGTAAAATTGCATCCGGCGTTTATTATCGGCCAA
GTGCCGATTCTCTAACCAAGCCAGGTTGGATTGAAGCGATGTACGCAATTGAAACACAGCTAAAGTTACCTGTGCATCTT
GCCGGTTTAACAAGCTTAACTTATCAAGGCTTGAATCATTATGTTCAGGTAGCAAATGCGCAAGTTTGGCTAGGTGTTGA
GCGCAAACAAAGTCTACCTAAATGGTTTCATGAGTTTAACGGGCAAAAGTGGTTATATTGCAGCAATAGTAAACTAACAA
AAGCAGACAGCGACTATAAAACTATCGAAATAAAAAATAAGCTTATCACTGCAAGTACGCCAGAATTAGCAGCGTATGAA
ATAGTTGAAGCTATAGGTAAACATATTACTTTTGAGCATGTCGCTGAGCTGTTTCAAGGACTGGTCAATCTCAGTCCTAG
GAAAGTGCAATCCATATTGGCGCGAAGCGTATCAATACAAACGAACCGAGTGTTTTTATTTTTAAGCCATTATTATCAAC
ATCCATGGGTTAAGAGACTGGATGAATCACTTATAAACTTGGGCGCGGGCAAACGACAAGTTGTTAAGAATGGTTATTAT
GATGAACGCTATCAAATAACAGTGCCACACAGCCTACCAAAATCAGAAGAATCAAACTAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References