Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) /RES-TIGR02293
Location 2312933..2313846 Replicon chromosome
Accession NZ_CP041247
Organism Raoultella electrica strain DSM 102253

Toxin (Protein)


Gene name - Uniprot ID -
Locus tag Electrica_RS10970 Protein ID WP_141964472.1
Coordinates 2312933..2313406 (-) Length 158 a.a.

Antitoxin (Protein)


Gene name - Uniprot ID -
Locus tag Electrica_RS10975 Protein ID WP_141964473.1
Coordinates 2313403..2313846 (-) Length 148 a.a.

Genomic Context

Electrica_RS10950Electrica_RS10955Electrica_RS10960Electrica_RS10965Electrica_RS11005Electrica_RS10970Electrica_RS10975Electrica_RS10995Electrica_RS11000
Location: 2309096..2310406 (1311 bp)
Type: Others
Protein ID: WP_141964469.1
Location: 2310403..2311338 (936 bp)
Type: Others
Protein ID: WP_141964470.1
Location: 2311349..2312347 (999 bp)
Type: Others
Protein ID: WP_131047979.1
Location: 2312357..2312911 (555 bp)
Type: Others
Protein ID: WP_141964471.1
Location: 2317417..2318310 (894 bp)
Type: Others
Protein ID: WP_100683647.1
Location: 2312933..2313406 (474 bp)
Type: Toxin
Protein ID: WP_141964472.1
Location: 2313403..2313846 (444 bp)
Type: Antitoxin
Protein ID: WP_141964473.1
Location: 2316012..2316488 (477 bp)
Type: Others
Protein ID: WP_141964474.1
Location: 2316680..2317309 (630 bp)
Type: Others
Protein ID: WP_131047984.1
ToxinAntitoxinOther genes
Loading, please wait
Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
Electrica_RS109502309096..2310406+1311WP_141964469.1type I-F CRISPR-associated protein Csy1-
Electrica_RS109552310403..2311338+936WP_141964470.1type I-F CRISPR-associated protein Csy2-
Electrica_RS109602311349..2312347+999WP_131047979.1type I-F CRISPR-associated protein Csy3-
Electrica_RS109652312357..2312911+555WP_141964471.1type I-F CRISPR-associated endoribonuclease Cas6/Csy4-
Electrica_RS109702312933..2313406-474WP_141964472.1RES domain-containing proteinToxin
Electrica_RS109752313403..2313846-444WP_141964473.1DUF2384 domain-containing proteinAntitoxin
Electrica_RS109952316012..2316488-477WP_141964474.1acid resistance repetitive basic protein Asr-
Electrica_RS110002316680..2317309-630WP_131047984.1NAD(P)-binding domain-containing protein-
Electrica_RS110052317417..2318310+894WP_100683647.1LysR family transcriptional regulator-

Associated MGEs

Loading, please wait
MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

RES domain

(3-148)

Antitoxin

Antitoxin Xre/MbcA/ParS-like, toxin-binding domain

(94-144)


Sequences

Toxin        


Download         Length: 158 a.a.        Molecular weight: 17558.87 Da        Isoelectric Point: 5.0692

>T127885 WP_141964472.1 NZ_CP041247:c2313406-2312933 [Raoultella electrica]
MIFYRLVMGRYASEAWSGSGANQYGGRWNHKGHPAVYVSASISLASLEILVHVKKDAVLNQYQLFSIDIPDDQIEYLDQH
WLPEDWQENPAPVSTMDLGTGWLQATSALALVLPSCIIPYENNAIINPLHPAFHQALASVQQYPFVFDTRLAEKTAS

Download         Length: 474 bp

>T127885 NZ_CP041247:c2313406-2312933 [Raoultella electrica]
ATGATTTTTTATCGCCTGGTGATGGGGCGGTACGCCAGCGAGGCCTGGAGTGGAAGCGGTGCAAACCAGTATGGCGGCCG
CTGGAATCATAAGGGCCATCCTGCCGTATATGTGTCCGCATCCATCTCGCTGGCCTCACTCGAAATACTGGTGCACGTAA
AAAAAGACGCGGTGCTTAATCAGTACCAGCTTTTCAGTATCGACATTCCAGATGACCAGATTGAATATCTGGATCAACAC
TGGTTACCCGAAGACTGGCAGGAAAACCCGGCTCCGGTATCCACCATGGATTTAGGGACTGGCTGGTTACAGGCCACCAG
CGCGCTGGCGTTAGTACTGCCTTCGTGCATCATCCCTTATGAAAACAACGCAATTATTAACCCGTTGCATCCTGCGTTTC
ATCAGGCGCTCGCCTCCGTTCAGCAGTACCCTTTTGTTTTTGATACCCGTCTGGCAGAAAAAACCGCATCCTGA

Antitoxin


Download         Length: 148 a.a.        Molecular weight: 16453.70 Da        Isoelectric Point: 5.7867

>AT127885 WP_141964473.1 NZ_CP041247:c2313846-2313403 [Raoultella electrica]
MRTWVPEQKPADNALWRYAGLPANRGMRLIEFLNQGLPVSVLDNIHEWTEMSKADILRVTGINERNVARRKSAGRTLTPD
ESERVARFVRVLDAAVDYFGSKDEAWNWLQSPVRGLGNVAPVDLIATETGALEVTDLIGRLEHGVFA

Download         Length: 444 bp

>AT127885 NZ_CP041247:c2313846-2313403 [Raoultella electrica]
ATGAGAACATGGGTTCCCGAGCAGAAGCCTGCTGACAACGCGCTCTGGCGCTATGCCGGTTTGCCTGCAAATCGGGGAAT
GCGGCTGATCGAATTTCTCAATCAGGGGCTACCAGTCAGCGTACTCGATAATATTCATGAATGGACCGAGATGTCTAAAG
CGGACATTCTTCGCGTAACGGGCATTAATGAGCGCAACGTTGCTCGTCGCAAAAGCGCGGGGCGAACCCTCACTCCCGAT
GAAAGTGAGCGGGTAGCACGCTTCGTTCGGGTGCTCGACGCCGCCGTTGATTATTTCGGCAGCAAAGATGAAGCCTGGAA
CTGGCTACAATCCCCGGTACGTGGGCTGGGCAATGTTGCTCCGGTCGATCTCATTGCAACTGAGACTGGCGCACTTGAGG
TAACCGATTTAATTGGCCGCCTGGAGCACGGAGTGTTTGCATGA

Similar Proteins

Only experimentally validated proteins are listed.

Loading, please wait
Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
Loading, please wait
Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

Loading, please wait
Source
ID
Structure
No matching records found

Antitoxin

Loading, please wait
Source
ID
Structure
No matching records found

References