Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | relBE/Txe-YefM |
| Location | 3770294..3770823 | Replicon | chromosome |
| Accession | NZ_CP040691 | ||
| Organism | Mycobacterium tuberculosis complex sp. N0155 | ||
Toxin (Protein)
| Gene name | relE | Uniprot ID | G0TI95 |
| Locus tag | FF955_RS17730 | Protein ID | WP_003417760.1 |
| Coordinates | 3770566..3770823 (+) | Length | 86 a.a. |
Antitoxin (Protein)
| Gene name | relB | Uniprot ID | G0TI94 |
| Locus tag | FF955_RS17725 | Protein ID | WP_003417757.1 |
| Coordinates | 3770294..3770569 (+) | Length | 92 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FF955_RS17690 (FF955_18365) | 3766867..3767556 | - | 690 | WP_003917774.1 | BBE domain-containing protein | - |
| FF955_RS17695 (FF955_18370) | 3767743..3768114 | - | 372 | WP_003417739.1 | FAD-binding protein | - |
| FF955_RS17700 | 3768012..3768230 | - | 219 | WP_157132559.1 | hypothetical protein | - |
| FF955_RS17705 (FF955_18380) | 3768257..3768517 | - | 261 | WP_003417741.1 | hypothetical protein | - |
| FF955_RS17710 (FF955_18385) | 3768632..3769021 | + | 390 | WP_003417745.1 | DUF732 domain-containing protein | - |
| FF955_RS17715 (FF955_18390) | 3769035..3769328 | - | 294 | WP_003417749.1 | DUF3017 domain-containing protein | - |
| FF955_RS17720 (FF955_18395) | 3769325..3770170 | - | 846 | WP_003417751.1 | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase | - |
| FF955_RS17725 (FF955_18400) | 3770294..3770569 | + | 276 | WP_003417757.1 | type II toxin-antitoxin system antitoxin RelJ | Antitoxin |
| FF955_RS17730 (FF955_18405) | 3770566..3770823 | + | 258 | WP_003417760.1 | Txe/YoeB family addiction module toxin | Toxin |
| FF955_RS17735 (FF955_18410) | 3770865..3772055 | + | 1191 | WP_003900033.1 | NADH:flavin oxidoreductase | - |
| FF955_RS17740 (FF955_18415) | 3772172..3772540 | + | 369 | WP_003417765.1 | FHA domain-containing protein | - |
| FF955_RS17745 (FF955_18420) | 3772537..3773088 | - | 552 | WP_003417767.1 | pentapeptide repeat protein MfpA | - |
| FF955_RS17750 (FF955_18425) | 3773095..3773676 | - | 582 | WP_003417769.1 | ATP/GTP-binding protein | - |
| FF955_RS17755 (FF955_18430) | 3773657..3774025 | - | 369 | WP_003417772.1 | DUF742 domain-containing protein | - |
| FF955_RS17760 (FF955_18435) | 3774003..3774395 | - | 393 | WP_003417776.1 | serine protease inhibitor | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 86 a.a. Molecular weight: 10070.30 Da Isoelectric Point: 6.4693
>T126735 WP_003417760.1 NZ_CP040691:3770566-3770823 [Mycobacterium tuberculosis complex sp. N0155]
VRSVNFDPDAWEDFLFWLAADRKTARRITRLIGEIQRDPFSGIGKPEPLQGELSGYWSRRIDDEHRLVYRAGDDEVTMLK
ARYHY
VRSVNFDPDAWEDFLFWLAADRKTARRITRLIGEIQRDPFSGIGKPEPLQGELSGYWSRRIDDEHRLVYRAGDDEVTMLK
ARYHY
Download Length: 258 bp
>T126735 NZ_CP040691:3770566-3770823 [Mycobacterium tuberculosis complex sp. N0155]
GTGAGAAGCGTCAACTTCGATCCCGATGCCTGGGAGGACTTCTTGTTCTGGCTGGCCGCTGATCGCAAAACGGCCCGTCG
GATCACCCGGTTGATCGGAGAAATTCAGCGTGATCCGTTCAGCGGGATCGGCAAACCCGAGCCGCTCCAAGGTGAGTTGT
CGGGATACTGGTCGCGCCGGATCGACGACGAACACCGGCTGGTGTATCGAGCGGGCGACGACGAAGTCACGATGCTGAAG
GCCCGATACCACTACTGA
GTGAGAAGCGTCAACTTCGATCCCGATGCCTGGGAGGACTTCTTGTTCTGGCTGGCCGCTGATCGCAAAACGGCCCGTCG
GATCACCCGGTTGATCGGAGAAATTCAGCGTGATCCGTTCAGCGGGATCGGCAAACCCGAGCCGCTCCAAGGTGAGTTGT
CGGGATACTGGTCGCGCCGGATCGACGACGAACACCGGCTGGTGTATCGAGCGGGCGACGACGAAGTCACGATGCTGAAG
GCCCGATACCACTACTGA
Antitoxin
Download Length: 92 a.a. Molecular weight: 10194.35 Da Isoelectric Point: 4.6652
>AT126735 WP_003417757.1 NZ_CP040691:3770294-3770569 [Mycobacterium tuberculosis complex sp. N0155]
MSISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENARRLMEAVARDKAGHSAFTKSV
DELREMAGGEE
MSISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENARRLMEAVARDKAGHSAFTKSV
DELREMAGGEE
Download Length: 276 bp
>AT126735 NZ_CP040691:3770294-3770569 [Mycobacterium tuberculosis complex sp. N0155]
ATGAGCATCAGTGCGAGCGAGGCGAGGCAGCGCCTGTTTCCACTCATCGAACAGGTCAATACCGATCACCAGCCGGTGCG
GATCACCTCCCGGGCCGGCGATGCGGTGCTGATGTCCGCCGACGACTACGACGCGTGGCAGGAAACGGTCTATCTGCTGC
GCTCACCGGAGAACGCCAGGCGGTTGATGGAAGCGGTTGCCCGGGATAAGGCTGGGCACTCGGCTTTCACCAAGTCTGTA
GATGAGCTGCGGGAGATGGCCGGCGGCGAGGAGTGA
ATGAGCATCAGTGCGAGCGAGGCGAGGCAGCGCCTGTTTCCACTCATCGAACAGGTCAATACCGATCACCAGCCGGTGCG
GATCACCTCCCGGGCCGGCGATGCGGTGCTGATGTCCGCCGACGACTACGACGCGTGGCAGGAAACGGTCTATCTGCTGC
GCTCACCGGAGAACGCCAGGCGGTTGATGGAAGCGGTTGCCCGGGATAAGGCTGGGCACTCGGCTTTCACCAAGTCTGTA
GATGAGCTGCGGGAGATGGCCGGCGGCGAGGAGTGA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|