Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | relBE/Txe-YefM |
| Location | 3763476..3764005 | Replicon | chromosome |
| Accession | NZ_CP040690 | ||
| Organism | Mycobacterium tuberculosis complex sp. N0153 | ||
Toxin (Protein)
| Gene name | relE | Uniprot ID | G0TI95 |
| Locus tag | FF954_RS17660 | Protein ID | WP_003417760.1 |
| Coordinates | 3763748..3764005 (+) | Length | 86 a.a. |
Antitoxin (Protein)
| Gene name | relB | Uniprot ID | G0TI94 |
| Locus tag | FF954_RS17655 | Protein ID | WP_003417757.1 |
| Coordinates | 3763476..3763751 (+) | Length | 92 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FF954_RS17620 (FF954_18255) | 3760049..3760738 | - | 690 | WP_003917774.1 | BBE domain-containing protein | - |
| FF954_RS17625 (FF954_18260) | 3760925..3761296 | - | 372 | WP_003417739.1 | FAD-binding protein | - |
| FF954_RS17630 | 3761194..3761412 | - | 219 | WP_157132559.1 | hypothetical protein | - |
| FF954_RS17635 (FF954_18270) | 3761439..3761699 | - | 261 | WP_003417741.1 | hypothetical protein | - |
| FF954_RS17640 (FF954_18275) | 3761814..3762203 | + | 390 | WP_003417745.1 | DUF732 domain-containing protein | - |
| FF954_RS17645 (FF954_18280) | 3762217..3762510 | - | 294 | WP_031663850.1 | DUF3017 domain-containing protein | - |
| FF954_RS17650 (FF954_18285) | 3762507..3763352 | - | 846 | WP_003905054.1 | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase | - |
| FF954_RS17655 (FF954_18290) | 3763476..3763751 | + | 276 | WP_003417757.1 | type II toxin-antitoxin system antitoxin RelJ | Antitoxin |
| FF954_RS17660 (FF954_18295) | 3763748..3764005 | + | 258 | WP_003417760.1 | Txe/YoeB family addiction module toxin | Toxin |
| FF954_RS17665 (FF954_18300) | 3764047..3765237 | + | 1191 | WP_003900033.1 | NADH:flavin oxidoreductase | - |
| FF954_RS17670 (FF954_18305) | 3765354..3765722 | + | 369 | WP_003417765.1 | FHA domain-containing protein | - |
| FF954_RS17675 (FF954_18310) | 3765719..3766270 | - | 552 | WP_003417767.1 | pentapeptide repeat protein MfpA | - |
| FF954_RS17680 (FF954_18315) | 3766277..3766858 | - | 582 | WP_031662192.1 | ATP/GTP-binding protein | - |
| FF954_RS17685 (FF954_18320) | 3766839..3767207 | - | 369 | WP_003417772.1 | DUF742 domain-containing protein | - |
| FF954_RS17690 (FF954_18325) | 3767185..3767577 | - | 393 | WP_003417776.1 | serine protease inhibitor | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 86 a.a. Molecular weight: 10070.30 Da Isoelectric Point: 6.4693
>T126675 WP_003417760.1 NZ_CP040690:3763748-3764005 [Mycobacterium tuberculosis complex sp. N0153]
VRSVNFDPDAWEDFLFWLAADRKTARRITRLIGEIQRDPFSGIGKPEPLQGELSGYWSRRIDDEHRLVYRAGDDEVTMLK
ARYHY
VRSVNFDPDAWEDFLFWLAADRKTARRITRLIGEIQRDPFSGIGKPEPLQGELSGYWSRRIDDEHRLVYRAGDDEVTMLK
ARYHY
Download Length: 258 bp
>T126675 NZ_CP040690:3763748-3764005 [Mycobacterium tuberculosis complex sp. N0153]
GTGAGAAGCGTCAACTTCGATCCCGATGCCTGGGAGGACTTCTTGTTCTGGCTGGCCGCTGATCGCAAAACGGCCCGTCG
GATCACCCGGTTGATCGGAGAAATTCAGCGTGATCCGTTCAGCGGGATCGGCAAACCCGAGCCGCTCCAAGGTGAGTTGT
CGGGATACTGGTCGCGCCGGATCGACGACGAACACCGGCTGGTGTATCGAGCGGGCGACGACGAAGTCACGATGCTGAAG
GCCCGATACCACTACTGA
GTGAGAAGCGTCAACTTCGATCCCGATGCCTGGGAGGACTTCTTGTTCTGGCTGGCCGCTGATCGCAAAACGGCCCGTCG
GATCACCCGGTTGATCGGAGAAATTCAGCGTGATCCGTTCAGCGGGATCGGCAAACCCGAGCCGCTCCAAGGTGAGTTGT
CGGGATACTGGTCGCGCCGGATCGACGACGAACACCGGCTGGTGTATCGAGCGGGCGACGACGAAGTCACGATGCTGAAG
GCCCGATACCACTACTGA
Antitoxin
Download Length: 92 a.a. Molecular weight: 10194.35 Da Isoelectric Point: 4.6652
>AT126675 WP_003417757.1 NZ_CP040690:3763476-3763751 [Mycobacterium tuberculosis complex sp. N0153]
MSISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENARRLMEAVARDKAGHSAFTKSV
DELREMAGGEE
MSISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENARRLMEAVARDKAGHSAFTKSV
DELREMAGGEE
Download Length: 276 bp
>AT126675 NZ_CP040690:3763476-3763751 [Mycobacterium tuberculosis complex sp. N0153]
ATGAGCATCAGTGCGAGCGAGGCGAGGCAGCGCCTGTTTCCACTCATCGAACAGGTCAATACCGATCACCAGCCGGTGCG
GATCACCTCCCGGGCCGGCGATGCGGTGCTGATGTCCGCCGACGACTACGACGCGTGGCAGGAAACGGTCTATCTGCTGC
GCTCACCGGAGAACGCCAGGCGGTTGATGGAAGCGGTTGCCCGGGATAAGGCTGGGCACTCGGCTTTCACCAAGTCTGTA
GATGAGCTGCGGGAGATGGCCGGCGGCGAGGAGTGA
ATGAGCATCAGTGCGAGCGAGGCGAGGCAGCGCCTGTTTCCACTCATCGAACAGGTCAATACCGATCACCAGCCGGTGCG
GATCACCTCCCGGGCCGGCGATGCGGTGCTGATGTCCGCCGACGACTACGACGCGTGGCAGGAAACGGTCTATCTGCTGC
GCTCACCGGAGAACGCCAGGCGGTTGATGGAAGCGGTTGCCCGGGATAAGGCTGGGCACTCGGCTTTCACCAAGTCTGTA
GATGAGCTGCGGGAGATGGCCGGCGGCGAGGAGTGA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|