Detailed information of TA system TA126163

Bioinformatically predicted

Overview

TA module

• Type: II
• Classification (family/domain): mazEF/MazF(toxin)
• Location: 2186541..2187070
• Replicon: chromosome
• Accession: NZ_CP040619
• Organism: Staphylococcus aureus strain J01

Toxin (Protein)

• Gene name: mazF
• Uniprot ID: -
• Locus tag: FF957_RS11310
• Protein ID: WP_000621175.1
• Coordinates: 2186541..2186903 (-)
• Length: 121 a.a.

Antitoxin (Protein)

• Gene name: mazE
• Uniprot ID: T1YCG8
• Locus tag: FF957_RS11315
• Protein ID: WP_000948331.1
• Coordinates: 2186900..2187070 (-)
• Length: 57 a.a.

Genomic Context

Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description
FF957_RS11290	2183520..2184290	-	771	WP_001041103.1	RNA polymerase sigma factor SigB	-
FF957_RS11295	2184265..2184744	-	480	WP_001190829.1	anti-sigma B factor RsbW	-
FF957_RS11300	2184746..2185072	-	327	WP_001052491.1	anti-sigma factor antagonist	-
FF957_RS11305	2185191..2186192	-	1002	WP_000390829.1	PP2C family protein-serine/threonine phosphatase	-
FF957_RS11310	2186541..2186903	-	363	WP_000621175.1	type II toxin-antitoxin system PemK/MazF family toxin	Toxin
FF957_RS11315	2186900..2187070	-	171	WP_000948331.1	type II toxin-antitoxin system antitoxin MazE	Antitoxin
FF957_RS11320	2187155..2188303	-	1149	WP_001281145.1	alanine racemase	-
FF957_RS11325	2188369..2188728	-	360	WP_000581200.1	holo-ACP synthase	-
FF957_RS11330	2188732..2189223	-	492	WP_001205910.1	PH domain-containing protein	-
FF957_RS11335	2189210..2190793	-	1584	WP_001294626.1	PH domain-containing protein	-
FF957_RS11340	2190786..2191265	-	480	WP_001287088.1	hypothetical protein	-
FF957_RS11345	2191473..2192033	-	561	WP_001092411.1	K(+)-transporting ATPase subunit C	-

Associated MGEs

MGE detail	Similar MGEs	Relative position	MGE Type	Cargo ARG	Virulence gene	Coordinates	Length (bp)

Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.

Domains

Predicted by InterproScan

Toxin

• mRNA interferase PemK-like (3-110)

Antitoxin

No domain identified.

Sequences

Toxin

Protein

• Length: 121 a.a.
• Molecular weight: 13441.69 Da
• Isoelectric Point: 10.1654

>T126163 WP_000621175.1 NZ_CP040619:c2186903-2186541 [Staphylococcus aureus]
MIRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVEIEKKKYKLDKDSVILLEQIR
TLDKKRLKEKLTYLSDDKMKEVDNALMISLGLNAVAHQKN

Nucleotide

• Length: 363 bp

>T126163 NZ_CP040619:c2186903-2186541 [Staphylococcus aureus]
ATGATTAGACGAGGAGATGTTTATTTAGCAGATTTATCACCAGTACAGGGATCTGAACAAGGGGGAGTCAGACCTGTAGT
CATAATTCAAAATGATACTGGTAATAAATATAGTCCTACAGTTATTGTTGCGGCAATAACTGGTAGGATTAATAAAGCGA
AAATACCGACACATGTAGAGATTGAAAAGAAAAAGTATAAGTTGGATAAAGACTCAGTTATATTATTAGAACAAATTCGT
ACACTTGATAAAAAACGATTGAAAGAAAAACTGACGTACTTATCCGATGATAAAATGAAAGAAGTAGATAATGCACTAAT
GATTAGTTTAGGGCTGAATGCAGTAGCTCACCAGAAAAATTAG

Antitoxin

Protein

• Length: 57 a.a.
• Molecular weight: 6251.78 Da
• Isoelectric Point: 3.8305

>AT126163 WP_000948331.1 NZ_CP040619:c2187070-2186900 [Staphylococcus aureus]
MLSFSQNRSHSLEQSLKEGYSQMADLNLSLANEAFPIECEACDCNETYLSSNSTNE

Nucleotide

• Length: 171 bp

>AT126163 NZ_CP040619:c2187070-2186900 [Staphylococcus aureus]
ATGTTATCTTTTAGTCAAAATAGAAGTCATAGCTTAGAACAATCTTTAAAAGAAGGATATTCACAAATGGCTGATTTAAA
TCTCTCCCTAGCGAACGAAGCTTTTCCGATAGAGTGTGAAGCATGCGATTGCAACGAAACATATTTATCTTCTAATTCAA
CGAATGAATGA

Structures

Antitoxin

• AlphaFold DB: A0A0E0VRZ1