Detailed information of TA system
Overview
TA module
| Type | IV | Classification (family/domain) | yeeUV (cbtA-cbeA)/CbtA-CbeA |
| Location | 876745..877580 | Replicon | chromosome |
| Accession | NZ_CP040456 | ||
| Organism | Escherichia coli strain UPEC132 | ||
Toxin (Protein)
| Gene name | yeeV | Uniprot ID | A0A836N5X5 |
| Locus tag | FE252_RS05790 | Protein ID | WP_016238532.1 |
| Coordinates | 876745..877122 (-) | Length | 126 a.a. |
Antitoxin (Protein)
| Gene name | yeeU | Uniprot ID | - |
| Locus tag | FE252_RS05795 | Protein ID | WP_016238531.1 |
| Coordinates | 877212..877580 (-) | Length | 123 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FE252_RS05755 | 871771..872526 | - | 756 | WP_000065240.1 | IS21-like element ISEc10 family helper ATPase IstB | - |
| FE252_RS05760 | 872523..874022 | - | 1500 | Protein_829 | IS21-like element ISEc10 family transposase | - |
| FE252_RS05765 | 874117..874659 | - | 543 | Protein_830 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| FE252_RS05770 | 874652..875047 | - | 396 | WP_000208383.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| FE252_RS05775 | 875116..875961 | - | 846 | WP_001280441.1 | DUF4942 domain-containing protein | - |
| FE252_RS05780 | 876046..876243 | - | 198 | WP_000839260.1 | DUF957 domain-containing protein | - |
| FE252_RS05785 | 876260..876748 | - | 489 | WP_016238533.1 | hypothetical protein | - |
| FE252_RS05790 | 876745..877122 | - | 378 | WP_016238532.1 | TA system toxin CbtA family protein | Toxin |
| FE252_RS05795 | 877212..877580 | - | 369 | WP_016238531.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin |
| FE252_RS05800 | 877630..878274 | - | 645 | WP_000094917.1 | hypothetical protein | - |
| FE252_RS05805 | 878293..878514 | - | 222 | WP_000692329.1 | DUF987 domain-containing protein | - |
| FE252_RS05810 | 878577..879053 | - | 477 | WP_001186726.1 | RadC family protein | - |
| FE252_RS05815 | 879069..879554 | - | 486 | WP_000849565.1 | antirestriction protein | - |
| FE252_RS05820 | 879609..880427 | - | 819 | WP_021533742.1 | DUF945 domain-containing protein | - |
| FE252_RS05830 | 880527..880760 | - | 234 | WP_001119729.1 | DUF905 family protein | - |
| FE252_RS05835 | 880839..881294 | - | 456 | WP_016238357.1 | hypothetical protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 126 a.a. Molecular weight: 14116.04 Da Isoelectric Point: 7.3842
>T125840 WP_016238532.1 NZ_CP040456:c877122-876745 [Escherichia coli]
MNTLPDTHVREASHCQSPVTIWQTLLTRLLDQHYGLTLNDTPFADERVIEQHIEAGISLCDAVNFLVEKYALVRTDQPGF
SAGAPSQLINSIDMLRARRATGLMTRNNYRMVNNITQGKHPEAKR
MNTLPDTHVREASHCQSPVTIWQTLLTRLLDQHYGLTLNDTPFADERVIEQHIEAGISLCDAVNFLVEKYALVRTDQPGF
SAGAPSQLINSIDMLRARRATGLMTRNNYRMVNNITQGKHPEAKR
Download Length: 378 bp
>T125840 NZ_CP040456:c877122-876745 [Escherichia coli]
ATGAACACATTACCCGATACACACGTACGGGAGGCATCGCATTGCCAGTCTCCCGTCACCATCTGGCAGACACTGCTCAC
CCGACTGCTGGATCAGCACTACGGCCTTACGCTGAATGACACACCGTTCGCTGATGAACGTGTGATTGAGCAGCATATTG
AGGCAGGGATTTCACTGTGTGACGCGGTGAACTTTCTCGTTGAAAAATACGCGCTGGTACGTACCGACCAGCCGGGATTC
AGCGCAGGAGCCCCGTCGCAGTTAATCAACAGCATTGATATGCTCCGGGCTCGCAGGGCGACCGGCCTGATGACCCGGAA
CAATTACAGAATGGTAAATAACATTACCCAGGGCAAGCATCCGGAGGCAAAACGATGA
ATGAACACATTACCCGATACACACGTACGGGAGGCATCGCATTGCCAGTCTCCCGTCACCATCTGGCAGACACTGCTCAC
CCGACTGCTGGATCAGCACTACGGCCTTACGCTGAATGACACACCGTTCGCTGATGAACGTGTGATTGAGCAGCATATTG
AGGCAGGGATTTCACTGTGTGACGCGGTGAACTTTCTCGTTGAAAAATACGCGCTGGTACGTACCGACCAGCCGGGATTC
AGCGCAGGAGCCCCGTCGCAGTTAATCAACAGCATTGATATGCTCCGGGCTCGCAGGGCGACCGGCCTGATGACCCGGAA
CAATTACAGAATGGTAAATAACATTACCCAGGGCAAGCATCCGGAGGCAAAACGATGA
Antitoxin
Download Length: 123 a.a. Molecular weight: 13694.46 Da Isoelectric Point: 6.4768
>AT125840 WP_016238531.1 NZ_CP040456:c877580-877212 [Escherichia coli]
VSDTLSGTTHPDDNHDRPWWGLPCTVTPCFGARLVQEGNRLHYLADRAGIRGQFSDADAYHLDQAFPLLMKQLELMLTSG
ELNPRHQHTVTLYAKRLTCEADTLGSCGYVYMAVYPTPETKK
VSDTLSGTTHPDDNHDRPWWGLPCTVTPCFGARLVQEGNRLHYLADRAGIRGQFSDADAYHLDQAFPLLMKQLELMLTSG
ELNPRHQHTVTLYAKRLTCEADTLGSCGYVYMAVYPTPETKK
Download Length: 369 bp
>AT125840 NZ_CP040456:c877580-877212 [Escherichia coli]
GTGTCAGACACACTCTCCGGGACAACGCATCCTGACGACAATCACGACCGCCCCTGGTGGGGACTCCCCTGCACCGTGAC
GCCCTGTTTTGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCAGACCGCGCCGGTATCAGAGGGCAGT
TCAGCGACGCGGATGCGTACCATCTGGACCAGGCCTTTCCGCTGCTGATGAAACAACTGGAACTCATGCTCACCAGCGGT
GAACTGAATCCCCGCCATCAGCATACCGTCACGCTGTATGCAAAAAGGCTGACCTGCGAAGCCGACACCCTCGGCAGTTG
TGGCTACGTTTATATGGCTGTTTATCCGACGCCCGAAACGAAAAAGTAA
GTGTCAGACACACTCTCCGGGACAACGCATCCTGACGACAATCACGACCGCCCCTGGTGGGGACTCCCCTGCACCGTGAC
GCCCTGTTTTGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCAGACCGCGCCGGTATCAGAGGGCAGT
TCAGCGACGCGGATGCGTACCATCTGGACCAGGCCTTTCCGCTGCTGATGAAACAACTGGAACTCATGCTCACCAGCGGT
GAACTGAATCCCCGCCATCAGCATACCGTCACGCTGTATGCAAAAAGGCTGACCTGCGAAGCCGACACCCTCGGCAGTTG
TGGCTACGTTTATATGGCTGTTTATCCGACGCCCGAAACGAAAAAGTAA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|