Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type IV Classification (family/domain) cptAB/-
Location 2499481..2500114 Replicon chromosome
Accession NZ_CP039143
Organism Acinetobacter sp. 10FS3-1

Toxin (Protein)


Gene name cptA Uniprot ID -
Locus tag E5Y90_RS11760 Protein ID WP_174660274.1
Coordinates 2499481..2499864 (-) Length 128 a.a.

Antitoxin (Protein)


Gene name cptB Uniprot ID -
Locus tag E5Y90_RS11765 Protein ID WP_151204001.1
Coordinates 2499857..2500114 (-) Length 86 a.a.

Genomic Context

E5Y90_RS11770E5Y90_RS11740E5Y90_RS11745E5Y90_RS11750E5Y90_RS11755E5Y90_RS11760E5Y90_RS11765E5Y90_RS11775E5Y90_RS11780E5Y90_RS11785
Location: 2500298..2501470 (1173 bp)
Type: Others
Protein ID: WP_174660275.1
Location: 2494811..2497093 (2283 bp)
Type: Others
Protein ID: WP_174660270.1
Location: 2497273..2497845 (573 bp)
Type: Others
Protein ID: WP_174660271.1
Location: 2497912..2498952 (1041 bp)
Type: Others
Protein ID: WP_174660272.1
Location: 2499191..2499364 (174 bp)
Type: Others
Protein ID: WP_174660273.1
Location: 2499481..2499864 (384 bp)
Type: Toxin
Protein ID: WP_174660274.1
Location: 2499857..2500114 (258 bp)
Type: Antitoxin
Protein ID: WP_151204001.1
Location: 2501528..2503018 (1491 bp)
Type: Others
Protein ID: WP_174660276.1
Location: 2503232..2503597 (366 bp)
Type: Others
Protein ID: WP_151203973.1
Location: 2503617..2504624 (1008 bp)
Type: Others
Protein ID: WP_151203974.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
E5Y90_RS117402494811..2497093-2283WP_174660270.1TRAP transporter large permease subunit-
E5Y90_RS117452497273..2497845-573WP_174660271.1rhombosortase-
E5Y90_RS117502497912..2498952-1041WP_174660272.1hypothetical protein-
E5Y90_RS117552499191..2499364-174WP_174660273.1hypothetical protein-
E5Y90_RS117602499481..2499864-384WP_174660274.1hypothetical proteinToxin
E5Y90_RS117652499857..2500114-258WP_151204001.1succinate dehydrogenase assembly factor 2Antitoxin
E5Y90_RS117702500298..2501470+1173WP_174660275.1acyl-CoA dehydrogenase family protein-
E5Y90_RS117752501528..2503018-1491WP_174660276.1NAD(P)/FAD-dependent oxidoreductase-
E5Y90_RS117802503232..2503597-366WP_151203973.150S ribosomal protein L17-
E5Y90_RS117852503617..2504624-1008WP_151203974.1DNA-directed RNA polymerase subunit alpha-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.


Antitoxin

Flavinator of succinate dehydrogenase

(10-80)


Sequences

Toxin        


Download         Length: 128 a.a.        Molecular weight: 15150.24 Da        Isoelectric Point: 9.9479

>T123549 WP_174660274.1 NZ_CP039143:c2499864-2499481 [Acinetobacter sp. 10FS3-1]
MDNRCFRLKRSKCALTFQLFIFAVLMFLLYQLLPLFLWGVCGILGVLIYHLFYHKTPQVEQLEYLDGREWSLSTVKKTYR
VAISHVIDHQAYIVVYFQHAKARPLLIWCDQLPLKQWKSLKVLTKML

Download         Length: 384 bp

>T123549 NZ_CP039143:c2499864-2499481 [Acinetobacter sp. 10FS3-1]
ATGGATAATCGTTGTTTCAGGCTGAAACGCAGTAAATGTGCCCTGACGTTTCAGCTATTTATTTTTGCTGTATTGATGTT
CCTGCTTTACCAGTTATTACCTCTGTTTCTATGGGGTGTATGTGGTATTTTAGGTGTCTTGATTTATCATCTGTTTTACC
ATAAAACTCCGCAGGTTGAACAGTTGGAATATCTGGATGGGCGAGAATGGTCACTCAGCACAGTAAAAAAGACCTATCGT
GTGGCGATTAGTCATGTGATTGATCATCAGGCCTATATCGTGGTGTATTTCCAGCATGCCAAGGCGCGCCCTTTGCTGAT
CTGGTGTGATCAATTGCCGCTAAAACAGTGGAAATCTTTAAAAGTTCTTACAAAAATGTTGTAA

Antitoxin


Download         Length: 86 a.a.        Molecular weight: 10237.78 Da        Isoelectric Point: 4.4663

>AT123549 WP_151204001.1 NZ_CP039143:c2500114-2499857 [Acinetobacter sp. 10FS3-1]
MTDEISLEERKVIYRARRGLKELDVYFDPYVKNYYLSAEPFEKEMFAELVAQEDPDLLDWFMEVSEPPRPELKAFILKLK
FYVHG

Download         Length: 258 bp

>AT123549 NZ_CP039143:c2500114-2499857 [Acinetobacter sp. 10FS3-1]
ATGACTGATGAAATAAGCTTAGAAGAACGCAAAGTGATTTATCGTGCACGTCGTGGCTTAAAAGAGCTGGATGTGTATTT
TGATCCCTACGTAAAAAACTACTATCTCAGCGCTGAACCTTTTGAAAAAGAAATGTTTGCTGAGCTGGTTGCTCAGGAAG
ATCCGGATCTGCTGGACTGGTTTATGGAAGTGTCGGAACCGCCACGCCCTGAATTGAAAGCCTTTATCCTGAAACTTAAA
TTTTACGTTCATGGATAA

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
No matching records found

Antitoxin

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Source
ID
Structure
No matching records found

References