Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/YoeB-DinJ
Location 1742415..1742940 Replicon chromosome
Accession NZ_CP038804
Organism Treponema putidum strain OMZ 835

Toxin (Protein)


Gene name relB Uniprot ID -
Locus tag E4N74_RS08100 Protein ID WP_255804911.1
Coordinates 1742415..1742678 (-) Length 88 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag E4N74_RS08105 Protein ID WP_255804913.1
Coordinates 1742683..1742940 (-) Length 86 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin YoeB

(5-84)

Antitoxin

RelB antitoxin/Antitoxin DinJ

(6-50)


Sequences

Toxin        


Download         Length: 88 a.a.        Molecular weight: 10510.08 Da        Isoelectric Point: 9.4465

>T123186 WP_255804911.1 NZ_CP038804:c1742678-1742415 [Treponema putidum]
MIKAWDEDAWMDYVYWQTEDKKTLKRINMLIKDIERNGHNGLGSPEPLKENLSGFWSRRIDKKNRLVYRIVDNVIQIIQC
RTHYGEK

Download         Length: 264 bp

>T123186 NZ_CP038804:c1742678-1742415 [Treponema putidum]
ATGATTAAAGCATGGGATGAAGATGCGTGGATGGATTATGTCTATTGGCAAACAGAAGATAAAAAAACATTAAAAAGAAT
CAATATGTTGATTAAAGATATAGAAAGAAATGGTCATAATGGCTTAGGCAGTCCTGAGCCATTAAAGGAAAATCTGTCAG
GATTCTGGAGCCGCAGGATCGATAAAAAAAATAGATTGGTTTATAGAATAGTCGATAATGTGATACAAATAATTCAGTGT
AGAACCCATTATGGTGAAAAATGA

Antitoxin


Download         Length: 86 a.a.        Molecular weight: 9880.42 Da        Isoelectric Point: 9.5364

>AT123186 WP_255804913.1 NZ_CP038804:c1742940-1742683 [Treponema putidum]
MAQINVNIRMDSEVKQEAEQLFDSLGMNMTTAFNIFIRQSLRIGGIPFKIISDERGFYNKYNQKKLHAAAKRMNEGKYIV
HDILE

Download         Length: 258 bp

>AT123186 NZ_CP038804:c1742940-1742683 [Treponema putidum]
ATGGCTCAAATAAATGTCAATATAAGAATGGATTCCGAAGTAAAACAAGAGGCTGAACAGCTTTTTGACAGTTTAGGAAT
GAATATGACAACTGCATTTAATATTTTCATTCGTCAATCATTAAGAATCGGCGGTATACCATTTAAAATTATAAGTGATG
AAAGAGGCTTTTATAATAAATATAATCAAAAAAAACTACATGCTGCTGCTAAAAGAATGAATGAAGGGAAATATATAGTG
CATGATATATTGGAATAG

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References