Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) TsaAT/-
Location 853455..853932 Replicon chromosome
Accession NZ_CP038021
Organism Staphylococcus aureus strain 04-002

Toxin (Protein)


Gene name TsaT Uniprot ID T1Y7S2
Locus tag E3I93_RS04200 Protein ID WP_000052076.1
Coordinates 853455..853643 (-) Length 63 a.a.

Antitoxin (Protein)


Gene name TsaA Uniprot ID T1Y6P8
Locus tag E3I93_RS04205 Protein ID WP_001059690.1
Coordinates 853672..853932 (-) Length 87 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
E3I93_RS04170 849409..849966 + 558 WP_000824491.1 hypothetical protein -
E3I93_RS04175 850307..850993 + 687 WP_001574556.1 thermonuclease family protein -
E3I93_RS04180 851350..851550 + 201 WP_001059082.1 cold-shock protein -
E3I93_RS04185 852046..852264 - 219 WP_000005879.1 hypothetical protein -
E3I93_RS04190 852326..852610 - 285 WP_001004401.1 hypothetical protein -
E3I93_RS04195 852698..853267 - 570 WP_001106663.1 hypothetical protein -
E3I93_RS04200 853455..853643 - 189 WP_000052076.1 hypothetical protein Toxin
E3I93_RS04205 853672..853932 - 261 WP_001059690.1 hypothetical protein Antitoxin
E3I93_RS04210 854273..854476 + 204 WP_000145163.1 sterile alpha motif-like domain-containing protein -
E3I93_RS04215 854473..854709 - 237 WP_000368687.1 hypothetical protein -
E3I93_RS04220 854934..855515 + 582 WP_001140696.1 phosphoglycerate mutase family protein -
E3I93_RS04225 855588..856205 - 618 WP_000255545.1 LysE/ArgO family amino acid transporter -
E3I93_RS04230 856361..856855 - 495 WP_000569884.1 GNAT family N-acetyltransferase -
E3I93_RS04235 857254..857676 - 423 WP_000974455.1 organic hydroperoxide resistance protein -
E3I93_RS04240 857824..858540 + 717 WP_000150036.1 type I 3-dehydroquinate dehydratase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(4-91)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 63 a.a.        Molecular weight: 7142.82 Da        Isoelectric Point: 9.9971

>T120652 WP_000052076.1 NZ_CP038021:c853643-853455 [Staphylococcus aureus]
MSLHFAILFWLALIFLVAATFILVLMKKTGKESKKESYLSFTVILYIFGFAILIYTFIFGVL

Download         Length: 189 bp

>T120652 NZ_CP038021:c853643-853455 [Staphylococcus aureus]
ATGTCTTTACATTTTGCAATTCTGTTTTGGCTAGCATTAATTTTCTTAGTTGCCGCTACGTTTATACTCGTATTAATGAA
AAAAACTGGCAAAGAATCTAAAAAAGAGTCCTATTTAAGTTTCACTGTCATTCTCTATATTTTCGGATTCGCTATTTTAA
TATACACATTTATATTTGGTGTGCTATAA

Antitoxin


Download         Length: 87 a.a.        Molecular weight: 9940.09 Da        Isoelectric Point: 4.0624

>AT120652 WP_001059690.1 NZ_CP038021:c853932-853672 [Staphylococcus aureus]
MNNILLNAINIVITTTFVIFNILITYNKDLDDLCWLLPGIIICGVILIVSFTIAMITKNWLSEILFFINIVLVLYYIYPI
FYSFIG

Download         Length: 261 bp

>AT120652 NZ_CP038021:c853932-853672 [Staphylococcus aureus]
ATGAATAACATTTTGTTAAATGCTATCAATATAGTTATTACTACCACTTTTGTTATCTTTAATATTTTAATCACATATAA
TAAAGATTTAGATGATTTATGTTGGCTCCTGCCTGGTATTATCATTTGTGGTGTGATACTCATAGTATCCTTTACCATTG
CAATGATAACTAAAAACTGGTTAAGTGAAATATTATTTTTTATAAATATCGTACTCGTTCTCTATTACATTTATCCTATT
TTTTATAGTTTTATAGGTTAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A0E0VP18

Antitoxin

Source ID Structure
AlphaFold DB A0A0E0VN56

References