Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) PumAB/upstrm_HI1419-dnstrm_HI1420
Location 2821394..2822015 Replicon chromosome
Accession NZ_CP036532
Organism Roseitalea porphyridii strain MA7-20

Toxin (Protein)


Gene name PumA Uniprot ID -
Locus tag E0E05_RS13730 Protein ID WP_131617232.1
Coordinates 2821394..2821690 (+) Length 99 a.a.

Antitoxin (Protein)


Gene name PumB Uniprot ID -
Locus tag E0E05_RS13735 Protein ID WP_131617233.1
Coordinates 2821704..2822015 (+) Length 104 a.a.

Genomic Context

E0E05_RS13710E0E05_RS13715E0E05_RS13720E0E05_RS13730E0E05_RS13735E0E05_RS13745E0E05_RS13750E0E05_RS13725E0E05_RS13740E0E05_RS13755E0E05_RS13760E0E05_RS13765
Location: 2817512..2818138 (627 bp)
Type: Others
Protein ID: WP_131617228.1
Location: 2818256..2819194 (939 bp)
Type: Others
Protein ID: WP_131617229.1
Location: 2819383..2819895 (513 bp)
Type: Others
Protein ID: WP_131617230.1
Location: 2821394..2821690 (297 bp)
Type: Toxin
Protein ID: WP_131617232.1
Location: 2821704..2822015 (312 bp)
Type: Antitoxin
Protein ID: WP_131617233.1
Location: 2823012..2823698 (687 bp)
Type: Others
Protein ID: WP_131617235.1
Location: 2823726..2824481 (756 bp)
Type: Others
Protein ID: WP_131617236.1
Location: 2819914..2821251 (1338 bp)
Type: Others
Protein ID: WP_131617231.1
Location: 2822037..2822726 (690 bp)
Type: Others
Protein ID: WP_131617234.1
Location: 2824525..2825061 (537 bp)
Type: Others
Protein ID: WP_210215716.1
Location: 2825078..2825671 (594 bp)
Type: Others
Protein ID: WP_131617237.1
Location: 2825671..2826129 (459 bp)
Type: Others
Protein ID: WP_131617238.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
E0E05_RS137102817512..2818138+627WP_131617228.1hypothetical protein-
E0E05_RS137152818256..2819194+939WP_131617229.1ribose-phosphate pyrophosphokinase-
E0E05_RS137202819383..2819895+513WP_131617230.1pseudoazurin-
E0E05_RS137252819914..2821251-1338WP_131617231.1chromate efflux transporter-
E0E05_RS137302821394..2821690+297WP_131617232.1type II toxin-antitoxin system RelE/ParE family toxinToxin
E0E05_RS137352821704..2822015+312WP_131617233.1putative addiction module antidote proteinAntitoxin
E0E05_RS137402822037..2822726-690WP_131617234.1SDR family NAD(P)-dependent oxidoreductase-
E0E05_RS137452823012..2823698+687WP_131617235.150S ribosomal protein L25/general stress protein Ctc-
E0E05_RS137502823726..2824481+756WP_131617236.1aminoacyl-tRNA hydrolase-
E0E05_RS137552824525..2825061-537WP_210215716.1LuxR family transcriptional regulator-
E0E05_RS137602825078..2825671-594WP_131617237.1cytochrome b/b6 domain-containing protein-
E0E05_RS137652825671..2826129-459WP_131617238.1PepSY domain-containing protein-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin HigB-like

(13-91)

Antitoxin

Uncharacterized protein HI1420

(2-93)


Sequences

Toxin        


Download         Length: 99 a.a.        Molecular weight: 11618.45 Da        Isoelectric Point: 10.4178

>T119940 WP_131617232.1 NZ_CP036532:2821394-2821690 [Roseitalea porphyridii]
MIEVRQTREFARWLHTLRDRRAREKIAIRLARIEATGNLGDYKRIDEIAELRIAYGPGYRLYFTFRGDVLIILLCGGDKK
SQQRDIRRARQIAEELDL

Download         Length: 297 bp

>T119940 NZ_CP036532:2821394-2821690 [Roseitalea porphyridii]
ATGATCGAGGTGCGCCAGACGCGCGAGTTCGCCCGATGGCTGCACACACTTAGGGATCGCCGCGCGCGGGAGAAGATCGC
CATCCGTCTGGCCCGGATCGAGGCCACCGGCAATCTCGGCGACTACAAGCGGATCGACGAGATCGCCGAACTGCGCATCG
CCTACGGACCGGGCTACAGGCTGTATTTCACGTTTCGGGGCGATGTCCTGATCATCCTGCTGTGCGGCGGCGACAAGAAG
AGCCAGCAGCGCGACATACGCCGCGCAAGACAGATCGCGGAAGAACTGGACCTGTAG

Antitoxin


Download         Length: 104 a.a.        Molecular weight: 11090.43 Da        Isoelectric Point: 5.1457

>AT119940 WP_131617233.1 NZ_CP036532:2821704-2822015 [Roseitalea porphyridii]
MTKTEPFDAARYLESEEGQRDLIADALESGDPAYLKHALNIVARARGMTAVARDAGVAREALYRALSENGDPRLSTLMGV
FKALDVQLTARTADHVAGARTSD

Download         Length: 312 bp

>AT119940 NZ_CP036532:2821704-2822015 [Roseitalea porphyridii]
ATGACGAAGACGGAGCCGTTCGACGCTGCCCGCTATCTGGAAAGCGAGGAAGGCCAGCGTGACCTGATCGCCGATGCGCT
GGAAAGCGGCGATCCGGCATATCTCAAGCACGCGCTCAACATCGTGGCCCGGGCGCGCGGAATGACCGCCGTCGCCCGGG
ACGCCGGCGTCGCCCGGGAAGCCCTTTACCGGGCACTGAGCGAGAACGGCGATCCCCGCCTGTCCACGCTGATGGGCGTC
TTCAAGGCGCTCGACGTGCAACTGACGGCCCGCACGGCCGATCATGTCGCGGGCGCGCGCACTTCCGATTGA

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
No matching records found

Antitoxin

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Source
ID
Structure
No matching records found

References