Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) PP_4151-4152/excise(antitoxin)
Location 5141364..5142311 Replicon chromosome
Accession NZ_CP036292
Organism Rosistilla oblonga strain CA51

Toxin (Protein)


Gene name PP_4152 Uniprot ID -
Locus tag CA51_RS18190 Protein ID WP_197451852.1
Coordinates 5141763..5142311 (+) Length 183 a.a.

Antitoxin (Protein)


Gene name PP_4151 Uniprot ID -
Locus tag CA51_RS18185 Protein ID WP_197451281.1
Coordinates 5141364..5141738 (+) Length 125 a.a.

Genomic Context

CA51_RS18180CA51_RS18185CA51_RS18190CA51_RS18200CA51_RS25930CA51_RS18210CA51_RS18215CA51_RS18165CA51_RS18170CA51_RS18175CA51_RS18195CA51_RS18205
Location: 5140336..5140995 (660 bp)
Type: Others
Protein ID: WP_145124237.1
Location: 5141364..5141738 (375 bp)
Type: Antitoxin
Protein ID: WP_197451281.1
Location: 5141763..5142311 (549 bp)
Type: Toxin
Protein ID: WP_197451852.1
Location: 5143998..5145002 (1005 bp)
Type: Others
Protein ID: WP_145099078.1
Location: 5145381..5145602 (222 bp)
Type: Others
Protein ID: WP_197451283.1
Location: 5145717..5146577 (861 bp)
Type: Others
Protein ID: WP_197451284.1
Location: 5146561..5147235 (675 bp)
Type: Others
Protein ID: WP_145122643.1
Location: 5137592..5138644 (1053 bp)
Type: Others
Protein ID: WP_145122637.1
Location: 5138732..5139085 (354 bp)
Type: Others
Protein ID: WP_145122638.1
Location: 5139089..5140327 (1239 bp)
Type: Others
Protein ID: WP_197451280.1
Location: 5142529..5143788 (1260 bp)
Type: Others
Protein ID: WP_197451282.1
Location: 5144975..5145382 (408 bp)
Type: Others
Protein ID: WP_145122641.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
CA51_RS181655137592..5138644-1053WP_145122637.1hypothetical protein-
CA51_RS181705138732..5139085-354WP_145122638.1DUF952 domain-containing protein-
CA51_RS181755139089..5140327-1239WP_197451280.1amidohydrolase family protein-
CA51_RS181805140336..5140995+660WP_145124237.1DNA-3-methyladenine glycosylase-
CA51_RS181855141364..5141738+375WP_197451281.1helix-turn-helix domain-containing proteinAntitoxin
CA51_RS181905141763..5142311+549WP_197451852.1PIN domain-containing proteinToxin
CA51_RS181955142529..5143788-1260WP_197451282.1PQQ-binding-like beta-propeller repeat protein-
CA51_RS182005143998..5145002+1005WP_145099078.1sugar phosphate isomerase/epimerase-
CA51_RS182055144975..5145382-408WP_145122641.1hypothetical protein-
CA51_RS259305145381..5145602+222WP_197451283.1hypothetical protein-
CA51_RS182105145717..5146577+861WP_197451284.1carbohydrate kinase-
CA51_RS182155146561..5147235+675WP_145122643.1ceramidase-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

PIN domain

(2-106)

Antitoxin

SinI-like, DNA-binding domain

(54-101)


Sequences

Toxin        


Download         Length: 183 a.a.        Molecular weight: 20783.89 Da        Isoelectric Point: 6.2276

>T119474 WP_197451852.1 NZ_CP036292:5141763-5142311 [Rosistilla oblonga]
MDACVLYPAPLRDLLLSLAASGIYRAKWSQKIHDEWTHNLLLKRPDLDAERLRRTCVQMNLAVPDSLVTEYEALIDSLHL
KDPDDRHVLAVAIRCNADSIVTFNQKDFDEAELKKYGLYTEHPDEFISNMLEVYAPNVLAAVREMRARLKNPPVEVAGFL
ETLRRQGLPQTVHILSRYASSL

Download         Length: 549 bp

>T119474 NZ_CP036292:5141763-5142311 [Rosistilla oblonga]
TTGGATGCCTGCGTCTTGTACCCGGCTCCACTTCGCGATTTGCTACTCAGCCTCGCAGCGTCGGGGATATATCGCGCGAA
GTGGTCGCAGAAAATTCACGATGAATGGACGCACAATCTGCTGCTGAAACGCCCCGACCTGGATGCCGAAAGATTACGAC
GAACGTGCGTGCAAATGAATCTGGCAGTTCCCGACAGTTTGGTGACGGAATACGAAGCCTTAATCGATTCGCTCCACCTC
AAAGATCCCGATGACCGGCATGTTCTTGCCGTTGCGATCCGCTGCAACGCCGATTCGATCGTCACCTTCAACCAGAAGGA
TTTTGATGAGGCGGAGCTAAAGAAATATGGTTTGTATACGGAGCACCCAGACGAATTCATTTCTAACATGCTCGAAGTCT
ACGCCCCCAACGTCCTTGCCGCAGTCCGCGAAATGCGCGCTCGCCTGAAGAACCCACCAGTCGAAGTGGCGGGATTTCTA
GAAACACTCCGGCGCCAAGGCTTGCCACAAACCGTGCATATATTGTCTCGATACGCAAGCTCGCTTTAG

Antitoxin


Download         Length: 125 a.a.        Molecular weight: 13699.79 Da        Isoelectric Point: 7.9990

>AT119474 WP_197451281.1 NZ_CP036292:5141364-5141738 [Rosistilla oblonga]
VARDIDPTSVITIQSTGDGRSIEVPKNVFDVLVKTLAIMAEGKAFSLIPVDKELTTQQAADILNVSRPFLSKVLDLGEIP
HRKVGRNRRVKFCDLIEYKKKQEQSSKAALQSLADEAQELGMGY

Download         Length: 375 bp

>AT119474 NZ_CP036292:5141364-5141738 [Rosistilla oblonga]
GTGGCCCGCGACATCGACCCCACCTCGGTCATAACGATCCAATCAACCGGAGACGGCCGGTCGATCGAGGTGCCCAAAAA
CGTATTCGATGTTTTGGTGAAAACCCTTGCGATCATGGCGGAAGGAAAGGCGTTCTCCTTGATCCCGGTCGACAAGGAAT
TAACCACTCAACAGGCGGCGGATATCTTGAACGTTTCACGCCCCTTCCTGAGCAAGGTGCTCGACTTGGGCGAGATTCCG
CATCGTAAGGTCGGTAGAAATCGCCGGGTCAAATTCTGCGATCTGATCGAATACAAAAAGAAGCAGGAACAGTCGAGCAA
AGCGGCATTGCAGTCTCTGGCCGATGAAGCACAGGAACTTGGCATGGGGTACTAG

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
No matching records found

Antitoxin

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Source
ID
Structure
No matching records found

References