119459

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) EcnAB/-
Location 369895..370256 Replicon chromosome
Accession NZ_CP036256
Organism Xanthomonas oryzae strain BAI23

Toxin (Protein)


Gene name EcnB Uniprot ID G7TLC7
Locus tag EYC57_RS01735 Protein ID WP_011257368.1
Coordinates 370122..370256 (+) Length 45 a.a.

Antitoxin (Protein)


Gene name EcnA Uniprot ID G7TLC8
Locus tag EYC57_RS01730 Protein ID WP_011407410.1
Coordinates 369895..370047 (+) Length 51 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
EYC57_RS01700 366168..366851 - 684 WP_131074321.1 dTMP kinase -
EYC57_RS01710 367331..367626 - 296 Protein_294 hypothetical protein -
EYC57_RS01715 367633..367872 - 240 WP_131074322.1 hypothetical protein -
EYC57_RS01720 367872..368542 - 671 Protein_296 hypothetical protein -
EYC57_RS01725 368864..369787 + 924 WP_053503273.1 arginase -
EYC57_RS01730 369895..370047 + 153 WP_011407410.1 entericidin A/B family lipoprotein Antitoxin
EYC57_RS01735 370122..370256 + 135 WP_011257368.1 entericidin A/B family lipoprotein Toxin
EYC57_RS01740 370497..370706 + 210 WP_053503274.1 CsbD family protein -
EYC57_RS01745 370875..372164 + 1290 WP_024744479.1 tryptophan--tRNA ligase -
EYC57_RS01750 372217..373239 + 1023 WP_165480506.1 MBL fold metallo-hydrolase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Entericidin A/B

(23-42)

Antitoxin

Entericidin A/B

(23-42)


Sequences

Toxin        


Download         Length: 45 a.a.        Molecular weight: 4457.33 Da        Isoelectric Point: 10.2040

>T119459 WP_011257368.1 NZ_CP036256:370122-370256 [Xanthomonas oryzae]
MKRAIVLLVLSMLSVGLLSGCNTVAGAGKDVKGAGEKVEDAARK

Download         Length: 135 bp

>T119459 NZ_CP036256:370122-370256 [Xanthomonas oryzae]
ATGAAGCGTGCAATTGTGCTGCTGGTGCTGTCCATGTTGTCGGTCGGTCTGCTGTCGGGCTGCAATACCGTCGCAGGTGC
CGGCAAGGACGTGAAGGGCGCCGGCGAGAAGGTGGAAGACGCAGCGCGTAAGTAA

Antitoxin


Download         Length: 51 a.a.        Molecular weight: 5046.99 Da        Isoelectric Point: 8.7942

>AT119459 WP_011407410.1 NZ_CP036256:369895-370047 [Xanthomonas oryzae]
MKRLLTLMVLGLFSAGVMTGCNTVAGAGKDLQGAGGKVEKTAEKCSDGKC

Download         Length: 153 bp

>AT119459 NZ_CP036256:369895-370047 [Xanthomonas oryzae]
ATGAAGCGACTGCTGACACTGATGGTGCTGGGCCTGTTTTCGGCCGGCGTGATGACGGGCTGCAACACCGTGGCTGGCGC
TGGCAAGGACTTGCAGGGCGCGGGTGGGAAGGTCGAGAAAACGGCCGAAAAATGCAGCGATGGTAAGTGCTGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A0C5UG40

Antitoxin

Source ID Structure
AlphaFold DB A0A0C5V759

References