119450

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) EcnAB/-
Location 370000..370361 Replicon chromosome
Accession NZ_CP036253
Organism Xanthomonas oryzae strain NCPPB4346

Toxin (Protein)


Gene name EcnB Uniprot ID G7TLC7
Locus tag EYR26_RS01785 Protein ID WP_011257368.1
Coordinates 370227..370361 (+) Length 45 a.a.

Antitoxin (Protein)


Gene name EcnA Uniprot ID G7TLC8
Locus tag EYR26_RS01780 Protein ID WP_011407410.1
Coordinates 370000..370152 (+) Length 51 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
EYR26_RS01755 366271..366954 - 684 WP_053503272.1 dTMP kinase -
EYR26_RS01765 367434..367975 - 542 Protein_306 GTPase -
EYR26_RS01770 367972..368645 - 674 Protein_307 hypothetical protein -
EYR26_RS01775 368969..369892 + 924 WP_053503273.1 arginase -
EYR26_RS01780 370000..370152 + 153 WP_011407410.1 entericidin A/B family lipoprotein Antitoxin
EYR26_RS01785 370227..370361 + 135 WP_011257368.1 entericidin A/B family lipoprotein Toxin
EYR26_RS01790 370602..370811 + 210 WP_053503274.1 CsbD family protein -
EYR26_RS01795 370980..372269 + 1290 WP_024744479.1 tryptophan--tRNA ligase -
EYR26_RS01800 372322..373344 + 1023 WP_165480506.1 MBL fold metallo-hydrolase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Entericidin A/B

(23-42)

Antitoxin

Entericidin A/B

(23-42)


Sequences

Toxin        


Download         Length: 45 a.a.        Molecular weight: 4457.33 Da        Isoelectric Point: 10.2040

>T119450 WP_011257368.1 NZ_CP036253:370227-370361 [Xanthomonas oryzae]
MKRAIVLLVLSMLSVGLLSGCNTVAGAGKDVKGAGEKVEDAARK

Download         Length: 135 bp

>T119450 NZ_CP036253:370227-370361 [Xanthomonas oryzae]
ATGAAGCGTGCAATTGTGCTGCTGGTGCTGTCCATGTTGTCGGTCGGTCTGCTGTCGGGCTGCAACACCGTCGCAGGTGC
CGGCAAGGACGTGAAGGGCGCCGGCGAGAAGGTGGAAGACGCAGCGCGTAAGTAA

Antitoxin


Download         Length: 51 a.a.        Molecular weight: 5046.99 Da        Isoelectric Point: 8.7942

>AT119450 WP_011407410.1 NZ_CP036253:370000-370152 [Xanthomonas oryzae]
MKRLLTLMVLGLFSAGVMTGCNTVAGAGKDLQGAGGKVEKTAEKCSDGKC

Download         Length: 153 bp

>AT119450 NZ_CP036253:370000-370152 [Xanthomonas oryzae]
ATGAAGCGACTGCTGACACTGATGGTGCTGGGCCTGTTTTCGGCCGGCGTGATGACGGGCTGCAACACCGTGGCTGGCGC
TGGCAAGGACTTGCAGGGCGCGGGTGGGAAGGTCGAGAAAACGGCCGAAAAATGCAGCGATGGTAAGTGCTGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A0C5UG40

Antitoxin

Source ID Structure
AlphaFold DB A0A0C5V759

References