119448

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) EcnAB/-
Location 4503362..4503723 Replicon chromosome
Accession NZ_CP036252
Organism Xanthomonas oryzae strain NJ611

Toxin (Protein)


Gene name EcnB Uniprot ID G7TLC7
Locus tag EYC54_RS21425 Protein ID WP_011257368.1
Coordinates 4503362..4503496 (-) Length 45 a.a.

Antitoxin (Protein)


Gene name EcnA Uniprot ID G7TLC8
Locus tag EYC54_RS21430 Protein ID WP_011407410.1
Coordinates 4503571..4503723 (-) Length 51 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
EYC54_RS21410 4500379..4501401 - 1023 WP_165480957.1 MBL fold metallo-hydrolase -
EYC54_RS21415 4501454..4502743 - 1290 WP_024744479.1 tryptophan--tRNA ligase -
EYC54_RS21420 4502912..4503121 - 210 WP_053503274.1 CsbD family protein -
EYC54_RS21425 4503362..4503496 - 135 WP_011257368.1 entericidin A/B family lipoprotein Toxin
EYC54_RS21430 4503571..4503723 - 153 WP_011407410.1 entericidin A/B family lipoprotein Antitoxin
EYC54_RS21435 4503831..4504754 - 924 WP_053503273.1 arginase -
EYC54_RS21440 4505076..4505749 + 674 Protein_3891 hypothetical protein -
EYC54_RS21445 4505746..4506287 + 542 Protein_3892 GTPase -
EYC54_RS21455 4506767..4507450 + 684 WP_053503272.1 dTMP kinase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Entericidin A/B

(23-42)

Antitoxin

Entericidin A/B

(23-42)


Sequences

Toxin        


Download         Length: 45 a.a.        Molecular weight: 4457.33 Da        Isoelectric Point: 10.2040

>T119448 WP_011257368.1 NZ_CP036252:c4503496-4503362 [Xanthomonas oryzae]
MKRAIVLLVLSMLSVGLLSGCNTVAGAGKDVKGAGEKVEDAARK

Download         Length: 135 bp

>T119448 NZ_CP036252:c4503496-4503362 [Xanthomonas oryzae]
ATGAAGCGTGCAATTGTGCTGCTGGTGCTGTCCATGTTGTCGGTCGGTCTGCTGTCGGGCTGCAATACCGTCGCAGGTGC
CGGCAAGGACGTGAAGGGCGCCGGCGAGAAGGTGGAAGACGCAGCGCGTAAGTAA

Antitoxin


Download         Length: 51 a.a.        Molecular weight: 5046.99 Da        Isoelectric Point: 8.7942

>AT119448 WP_011407410.1 NZ_CP036252:c4503723-4503571 [Xanthomonas oryzae]
MKRLLTLMVLGLFSAGVMTGCNTVAGAGKDLQGAGGKVEKTAEKCSDGKC

Download         Length: 153 bp

>AT119448 NZ_CP036252:c4503723-4503571 [Xanthomonas oryzae]
ATGAAGCGACTGCTGACACTGATGGTGCTGGGCCTGTTTTCGGCCGGCGTGATGACGGGCTGCAACACCGTGGCTGGCGC
TGGCAAGGACTTGCAGGGCGCGGGTGGGAAGGTCGAGAAAACGGCCGAAAAATGCAGCGATGGTAAGTGCTGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A0C5UG40

Antitoxin

Source ID Structure
AlphaFold DB A0A0C5V759

References