Detailed information of TA system
Overview
TA module
Type | II | Classification (family/domain) | mazEF/PRK09907(toxin) |
Location | 20635..21206 | Replicon | plasmid pR712_02 |
Accession | NZ_CP036248 | ||
Organism | Enterococcus faecalis R712 |
Toxin (Protein)
Gene name | mazF | Uniprot ID | R3HR30 |
Locus tag | EYB36_RS00555 | Protein ID | WP_001278770.1 |
Coordinates | 20865..21206 (+) | Length | 114 a.a. |
Antitoxin (Protein)
Gene name | mazE | Uniprot ID | A0A6B1XRC3 |
Locus tag | EYB36_RS00550 | Protein ID | WP_000958277.1 |
Coordinates | 20635..20865 (+) | Length | 77 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
EYB36_RS00525 | 15903..16505 | - | 603 | WP_001062586.1 | recombinase family protein | - |
EYB36_RS15650 | 16519..16689 | - | 171 | WP_000713595.1 | hypothetical protein | - |
EYB36_RS00530 | 17012..17692 | + | 681 | WP_001015311.1 | IS6-like element IS1216 family transposase | - |
EYB36_RS00535 | 17820..18779 | + | 960 | WP_000222577.1 | IS30-like element IS1252 family transposase | - |
EYB36_RS00540 | 19212..19784 | - | 573 | WP_000170424.1 | recombinase family protein | - |
EYB36_RS00545 | 19800..20405 | - | 606 | WP_000599739.1 | cell filamentation protein | - |
EYB36_RS00550 | 20635..20865 | + | 231 | WP_000958277.1 | hypothetical protein | Antitoxin |
EYB36_RS00555 | 20865..21206 | + | 342 | WP_001278770.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin |
EYB36_RS00560 | 21318..22256 | + | 939 | WP_001053446.1 | hypothetical protein | - |
EYB36_RS00565 | 22503..23105 | + | 603 | WP_000892301.1 | Fic family protein | - |
EYB36_RS00570 | 23818..24084 | + | 267 | WP_000246197.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
EYB36_RS00575 | 24077..24352 | + | 276 | WP_002402695.1 | type II toxin-antitoxin system YafQ family toxin | - |
EYB36_RS00580 | 25231..25557 | - | 327 | WP_000606299.1 | hypothetical protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | inside | Non-Mobilizable plasmid | erm(B) / aph(3')-III / ant(6)-Ia | prgB/asc10 | 1..97950 | 97950 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 114 a.a. Molecular weight: 13220.44 Da Isoelectric Point: 8.8595
>T119429 WP_001278770.1 NZ_CP036248:20865-21206 [Enterococcus faecalis R712]
MSDEKKYIPKKGDIVWIDFDPSAGKEIQKRRPGLVVSRYEFNRKTMFAVICPITSTIKNMPTRYTLPDEMETHGQVVISQ
LKSLDFTERKLSQIEHLPLKDMAKIDQIIEYIF
MSDEKKYIPKKGDIVWIDFDPSAGKEIQKRRPGLVVSRYEFNRKTMFAVICPITSTIKNMPTRYTLPDEMETHGQVVISQ
LKSLDFTERKLSQIEHLPLKDMAKIDQIIEYIF
Download Length: 342 bp
>T119429 NZ_CP036248:20865-21206 [Enterococcus faecalis R712]
ATGAGTGACGAAAAGAAATATATTCCTAAAAAGGGCGATATTGTATGGATAGATTTCGATCCTTCAGCTGGAAAAGAAAT
ACAGAAAAGACGTCCAGGTCTAGTAGTTTCTAGATATGAGTTTAATAGAAAGACAATGTTTGCAGTAATTTGTCCCATAA
CTTCTACAATTAAAAATATGCCCACTCGTTATACATTACCTGATGAAATGGAAACTCATGGACAAGTCGTTATTTCCCAA
TTAAAATCTTTAGATTTTACAGAAAGAAAGTTAAGCCAAATAGAACATTTACCATTAAAGGATATGGCTAAAATAGATCA
AATCATTGAATACATTTTTTAA
ATGAGTGACGAAAAGAAATATATTCCTAAAAAGGGCGATATTGTATGGATAGATTTCGATCCTTCAGCTGGAAAAGAAAT
ACAGAAAAGACGTCCAGGTCTAGTAGTTTCTAGATATGAGTTTAATAGAAAGACAATGTTTGCAGTAATTTGTCCCATAA
CTTCTACAATTAAAAATATGCCCACTCGTTATACATTACCTGATGAAATGGAAACTCATGGACAAGTCGTTATTTCCCAA
TTAAAATCTTTAGATTTTACAGAAAGAAAGTTAAGCCAAATAGAACATTTACCATTAAAGGATATGGCTAAAATAGATCA
AATCATTGAATACATTTTTTAA
Antitoxin
Download Length: 77 a.a. Molecular weight: 8536.45 Da Isoelectric Point: 4.2412
>AT119429 WP_000958277.1 NZ_CP036248:20635-20865 [Enterococcus faecalis R712]
MLTTKSRKQGSSVVLTLPSNNGQKPKADQEYIVMYSDDGTITLVPKLQDPFSGGSEGEYYEKDEWYDIEPGGRELF
MLTTKSRKQGSSVVLTLPSNNGQKPKADQEYIVMYSDDGTITLVPKLQDPFSGGSEGEYYEKDEWYDIEPGGRELF
Download Length: 231 bp
>AT119429 NZ_CP036248:20635-20865 [Enterococcus faecalis R712]
ATGTTAACCACAAAATCTAGAAAACAAGGAAGTTCTGTAGTATTGACATTACCATCTAACAACGGACAGAAACCAAAAGC
AGACCAAGAATATATAGTGATGTATTCTGATGATGGGACAATTACGTTAGTCCCTAAATTACAAGATCCATTTAGTGGTG
GATCAGAAGGGGAGTACTACGAAAAAGATGAATGGTATGACATTGAACCTGGAGGGAGAGAATTATTTTAA
ATGTTAACCACAAAATCTAGAAAACAAGGAAGTTCTGTAGTATTGACATTACCATCTAACAACGGACAGAAACCAAAAGC
AGACCAAGAATATATAGTGATGTATTCTGATGATGGGACAATTACGTTAGTCCCTAAATTACAAGATCCATTTAGTGGTG
GATCAGAAGGGGAGTACTACGAAAAAGATGAATGGTATGACATTGAACCTGGAGGGAGAGAATTATTTTAA
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Structures
Toxin
Source | ID | Structure |
---|---|---|
AlphaFold DB | R3HR30 |
Antitoxin
Source | ID | Structure |
---|---|---|
AlphaFold DB | A0A6B1XRC3 |