Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) FicTA/Fic(toxin)
Location 1300540..1301410 Replicon chromosome
Accession NZ_CP035946
Organism Campylobacter canadensis strain LMG 24001

Toxin (Protein)


Gene name Fic Uniprot ID -
Locus tag CCANL266_RS06185 Protein ID WP_172232900.1
Coordinates 1300775..1301410 (+) Length 212 a.a.

Antitoxin (Protein)


Gene name Fti Uniprot ID -
Locus tag CCANL266_RS06180 Protein ID WP_172232888.1
Coordinates 1300540..1300788 (+) Length 83 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
CCANL266_RS06135 1296417..1297667 + 1251 WP_172232873.1 adenylosuccinate synthase -
CCANL266_RS06140 1297664..1298077 + 414 WP_172232876.1 hypothetical protein -
CCANL266_RS06145 1298093..1298848 + 756 WP_172232879.1 hypothetical protein -
CCANL266_RS06150 1299130..1299378 + 249 WP_172232882.1 hypothetical protein -
CCANL266_RS06155 1299365..1299574 + 210 WP_172232885.1 hypothetical protein -
CCANL266_RS06160 1299600..1299848 + 249 WP_172232888.1 hypothetical protein -
CCANL266_RS06165 1299835..1300044 + 210 WP_172232891.1 hypothetical protein -
CCANL266_RS06170 1300070..1300318 + 249 WP_172232894.1 hypothetical protein -
CCANL266_RS06175 1300305..1300514 + 210 WP_172232897.1 hypothetical protein -
CCANL266_RS06180 1300540..1300788 + 249 WP_172232888.1 hypothetical protein Antitoxin
CCANL266_RS06185 1300775..1301410 + 636 WP_172232900.1 Fic family protein Toxin
CCANL266_RS06190 1301475..1301960 + 486 WP_172232903.1 S26 family signal peptidase -
CCANL266_RS06195 1302021..1302224 + 204 WP_172232906.1 hypothetical protein -
CCANL266_RS06200 1302214..1302957 + 744 WP_172232909.1 zeta toxin family protein -
CCANL266_RS06205 1302984..1303364 + 381 WP_172232912.1 conjugal transfer protein TraM -
CCANL266_RS06210 1303443..1304123 + 681 WP_172232915.1 AAA family ATPase -
CCANL266_RS06215 1304128..1304334 + 207 WP_172232918.1 hypothetical protein -
CCANL266_RS06220 1304754..1304927 - 174 WP_172229570.1 hypothetical protein -
CCANL266_RS06225 1304920..1306362 - 1443 WP_172232921.1 DNA methylase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Fido domain

(49-153)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 212 a.a.        Molecular weight: 24654.40 Da        Isoelectric Point: 9.7511

>T119116 WP_172232900.1 NZ_CP035946:1300775-1301410 [Campylobacter canadensis]
MKENKLSFEELLTKNKLGIEDFKELDKASRFYTGIREKELSKTPIKGNFDYTHLKTIHKHIFQDVFSWAGKDRFELNLLG
PMFKGDSMFCNGQFIPNEANRMFSNLKKQNYFKNCKNIDELAKNLAEFMGDLNALHPFREGNGRTQRIFINQLAQNAGYK
LDLRLIDKDKMIDASIKAMDCDYKKLQTLIKVNLKSFKQNLEKEQSQGISY

Download         Length: 636 bp

>T119116 NZ_CP035946:1300775-1301410 [Campylobacter canadensis]
ATGAAAGAAAATAAACTAAGTTTTGAAGAACTTCTAACTAAAAATAAATTAGGTATAGAAGATTTTAAGGAGCTTGATAA
AGCATCAAGATTTTATACAGGAATCAGAGAAAAAGAATTATCAAAAACACCCATTAAAGGCAATTTTGATTATACACATT
TAAAAACTATTCATAAACATATTTTTCAAGATGTATTTAGCTGGGCTGGTAAAGATAGATTTGAACTTAATTTATTAGGA
CCTATGTTTAAAGGCGATAGTATGTTTTGTAACGGACAATTTATACCAAATGAAGCAAATCGTATGTTTTCCAATTTAAA
AAAACAAAACTATTTTAAAAATTGTAAAAACATTGATGAACTAGCAAAAAATTTAGCTGAATTTATGGGAGATTTAAATG
CCTTACATCCATTTAGAGAAGGTAACGGAAGAACACAAAGAATATTTATAAATCAATTAGCACAAAATGCAGGATATAAA
TTAGACCTAAGATTAATTGATAAAGATAAAATGATAGATGCAAGTATAAAAGCTATGGATTGTGATTATAAAAAACTCCA
AACCCTTATTAAAGTTAATTTAAAAAGCTTTAAACAAAACCTTGAAAAAGAGCAATCGCAAGGAATATCATATTAA

Antitoxin


Download         Length: 83 a.a.        Molecular weight: 9598.77 Da        Isoelectric Point: 4.5593

>AT119116 WP_172232888.1 NZ_CP035946:1300540-1300788 [Campylobacter canadensis]
MKNYQESNSLKESLEILKRYKNDVSKEDYEDIKGIIGNHAIENTYMNELDIIALVKQSVYGLSADEIIAEYKEKGYVDYE
RK

Download         Length: 249 bp

>AT119116 NZ_CP035946:1300540-1300788 [Campylobacter canadensis]
ATGAAAAATTACCAAGAGTCAAATTCATTAAAAGAAAGCTTAGAAATTTTAAAAAGATATAAAAATGATGTGAGCAAAGA
AGATTATGAAGATATAAAAGGGATTATAGGAAACCACGCAATAGAAAATACATATATGAATGAGTTAGATATTATAGCAC
TAGTTAAACAATCTGTTTATGGTTTAAGTGCTGATGAAATAATAGCAGAATATAAAGAGAAAGGCTATGTAGATTATGAA
AGAAAATAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References