Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mazEF/PRK09907(toxin)
Location 544496..545067 Replicon chromosome
Accession NZ_CP035654
Organism Enterococcus faecium strain UAMSEF_08

Toxin (Protein)


Gene name mazF Uniprot ID Q3Y2B8
Locus tag EWM54_RS03160 Protein ID WP_002286801.1
Coordinates 544726..545067 (+) Length 114 a.a.

Antitoxin (Protein)


Gene name mazE Uniprot ID A0A828ZZN9
Locus tag EWM54_RS03155 Protein ID WP_002323011.1
Coordinates 544496..544726 (+) Length 77 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
EWM54_RS03105 539632..540960 + 1329 WP_008265691.1 FAD-containing oxidoreductase -
EWM54_RS03110 540982..541608 + 627 WP_002286816.1 cysteine hydrolase -
EWM54_RS03115 541791..542372 + 582 WP_002286813.1 TetR/AcrR family transcriptional regulator -
EWM54_RS03135 543104..543451 + 348 WP_002286808.1 SOS response-associated peptidase family protein -
EWM54_RS03140 543427..543666 + 240 WP_002321938.1 SOS response-associated peptidase family protein -
EWM54_RS03145 543871..544209 - 339 WP_002286804.1 hypothetical protein -
EWM54_RS03155 544496..544726 + 231 WP_002323011.1 hypothetical protein Antitoxin
EWM54_RS03160 544726..545067 + 342 WP_002286801.1 type II toxin-antitoxin system PemK/MazF family toxin Toxin
EWM54_RS03165 545917..546102 + 186 WP_002304207.1 hypothetical protein -
EWM54_RS03170 546607..546801 + 195 WP_002297028.1 hypothetical protein -
EWM54_RS03175 546959..547241 + 283 Protein_524 transposase -
EWM54_RS03185 547485..548315 - 831 WP_002286789.1 manganese catalase family protein -
EWM54_RS03190 548523..549857 + 1335 WP_002286788.1 ABC transporter substrate-binding protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

mRNA interferase PemK-like

(10-113)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 114 a.a.        Molecular weight: 13302.68 Da        Isoelectric Point: 9.9044

>T118186 WP_002286801.1 NZ_CP035654:544726-545067 [Enterococcus faecium]
VSEERIYIPKKGDIVWIDFDPSVGKEIQKRRPGLVVSRYEFNRKTMFSVICPITSTIKNLPTRYSLPEELDIKGQVIITQ
LKSLDFKERKLKKIENLPLQDMAKIDQIIQYMF

Download         Length: 342 bp

>T118186 NZ_CP035654:544726-545067 [Enterococcus faecium]
GTGTCAGAAGAAAGAATTTATATTCCTAAAAAAGGTGATATTGTATGGATTGATTTTGATCCCTCCGTAGGAAAAGAAAT
TCAAAAAAGACGACCAGGACTAGTCGTCTCTCGTTATGAATTTAACCGTAAAACAATGTTTTCGGTCATATGTCCAATTA
CTTCCACTATAAAGAATTTACCGACACGTTACTCATTACCTGAAGAGCTAGATATAAAAGGACAAGTAATTATTACACAA
TTAAAATCTCTTGATTTTAAGGAACGAAAACTCAAAAAAATAGAAAACTTACCATTGCAAGACATGGCTAAAATTGATCA
GATTATACAGTATATGTTTTAA

Antitoxin


Download         Length: 77 a.a.        Molecular weight: 8523.39 Da        Isoelectric Point: 3.9078

>AT118186 WP_002323011.1 NZ_CP035654:544496-544726 [Enterococcus faecium]
MLVTKSRLQGSSVVVTLPSDNGKKPSENQEYIVVYSDDGTITLVPKIEDPFSGGEEAEYYEKDEWEDLTPEGREIL

Download         Length: 231 bp

>AT118186 NZ_CP035654:544496-544726 [Enterococcus faecium]
ATGCTTGTTACAAAATCTAGATTACAAGGAAGTTCTGTAGTGGTAACTTTACCTTCTGATAACGGAAAGAAACCTTCAGA
AAACCAAGAATATATCGTTGTGTATTCTGATGATGGAACAATTACGTTAGTTCCAAAAATTGAAGATCCATTTAGTGGTG
GGGAAGAGGCCGAGTATTATGAGAAAGACGAATGGGAAGATTTAACTCCTGAAGGGAGAGAAATTTTATAG

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A829FD66

Antitoxin

Source ID Structure
AlphaFold DB A0A828ZZN9

References