116185

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) TsdAT/-
Location 1482800..1483314 Replicon chromosome
Accession NZ_CP034486
Organism Staphylococcus aureus strain PMB 64-1

Toxin (Protein)


Gene name TsdT Uniprot ID A0A641A3V2
Locus tag EJN87_RS07670 Protein ID WP_000581793.1
Coordinates 1482800..1483009 (-) Length 70 a.a.

Antitoxin (Protein)


Gene name TsdA Uniprot ID W8UW13
Locus tag EJN87_RS07675 Protein ID WP_000138932.1
Coordinates 1483021..1483314 (-) Length 98 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
EJN87_RS07650 1478309..1479667 - 1359 WP_000611483.1 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase -
EJN87_RS07655 1479682..1480752 - 1071 WP_000159627.1 D-alanine--D-alanine ligase -
EJN87_RS07660 1481070..1482272 + 1203 WP_001109939.1 rod shape-determining protein RodA -
EJN87_RS07665 1482535..1482672 - 138 WP_000828354.1 hypothetical protein -
EJN87_RS07670 1482800..1483009 - 210 WP_000581793.1 heavy-metal-associated domain-containing protein Toxin
EJN87_RS07675 1483021..1483314 - 294 WP_000138932.1 copper-sensing transcriptional repressor CsoR Antitoxin
EJN87_RS07680 1483480..1484964 + 1485 WP_000571549.1 cardiolipin synthase -
EJN87_RS07685 1484992..1485639 + 648 WP_001187628.1 HD domain-containing protein -
EJN87_RS07700 1486253..1487125 - 873 WP_000725802.1 membrane protein insertase YidC -
EJN87_RS07705 1487211..1487852 - 642 WP_000483155.1 thiamine phosphate synthase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Heavy metal-associated domain, HMA

(23-66)

Antitoxin

Metal-sensitive transcriptional repressor

(14-92)


Sequences

Toxin        


Download         Length: 70 a.a.        Molecular weight: 7809.75 Da        Isoelectric Point: 4.1008

>T116185 WP_000581793.1 NZ_CP034486:c1483009-1482800 [Staphylococcus aureus]
MIHQNTIYTAGIETEEQVSQLTERISNMIGVHQVNINIIDGQVTVSYETPANLNSIEKEIYDEGYKIVI

Download         Length: 210 bp

>T116185 NZ_CP034486:c1483009-1482800 [Staphylococcus aureus]
ATGATACATCAAAATACGATTTACACAGCGGGAATTGAAACAGAAGAACAAGTAAGTCAATTGACAGAACGCATTTCAAA
TATGATAGGTGTTCATCAAGTGAATATTAATATAATAGATGGTCAAGTAACTGTATCGTATGAGACACCAGCAAATTTGA
ATAGTATTGAAAAAGAAATCTATGATGAAGGATACAAAATTGTAATTTAG

Antitoxin


Download         Length: 98 a.a.        Molecular weight: 11197.82 Da        Isoelectric Point: 6.2243

>AT116185 WP_000138932.1 NZ_CP034486:c1483314-1483021 [Staphylococcus aureus]
MTEQDNAHHSEQIKTNLKSRLNRIEGQVRAINRMIEEDVYCDDVLTQIRATRSALNSVAIKLLEQHMKSCIMNKVNQGAQ
EEAMEELLVTFQKLIKD

Download         Length: 294 bp

>AT116185 NZ_CP034486:c1483314-1483021 [Staphylococcus aureus]
ATGACTGAACAAGATAATGCACATCATTCTGAACAAATAAAAACGAATCTTAAATCACGTTTAAATCGAATTGAAGGACA
AGTGAGAGCGATTAATCGCATGATTGAAGAAGATGTCTATTGTGATGATGTCCTTACGCAAATAAGAGCGACACGTTCGG
CGTTAAACAGTGTTGCGATAAAGTTATTAGAACAACATATGAAAAGTTGTATTATGAATAAAGTTAATCAAGGTGCTCAG
GAAGAGGCGATGGAAGAGTTATTAGTGACTTTTCAAAAATTGATTAAAGACTAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A641A3V2

Antitoxin

Source ID Structure
AlphaFold DB W8UW13

References