Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | spoIISABC/- |
Location | 1348045..1348961 | Replicon | chromosome |
Accession | NZ_CP034484 | ||
Organism | Bacillus subtilis subsp. subtilis NCIB 3610 = ATCC 6051 = DSM 10 strain NCIB 3610 |
Toxin (Protein)
Gene name | spoIISA | Uniprot ID | O34853 |
Locus tag | EJJ34_RS07150 | Protein ID | WP_003244695.1 |
Coordinates | 1348215..1348961 (-) | Length | 249 a.a. |
Antitoxin (Protein)
Gene name | spoIISB | Uniprot ID | G4EXD8 |
Locus tag | EJJ34_RS07145 | Protein ID | WP_003232646.1 |
Coordinates | 1348045..1348215 (-) | Length | 57 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
EJJ34_RS07110 (EJJ34_07115) | 1344908..1345237 | + | 330 | WP_003232660.1 | XkdW family protein | - |
EJJ34_RS07115 (EJJ34_07120) | 1345234..1345398 | + | 165 | WP_003232658.1 | XkdX family protein | - |
EJJ34_RS07120 (EJJ34_07125) | 1345442..1346281 | + | 840 | WP_003245597.1 | phage-like element PBSX protein XepA | - |
EJJ34_RS07125 (EJJ34_07130) | 1346334..1346603 | + | 270 | WP_003232655.1 | hemolysin XhlA family protein | - |
EJJ34_RS07130 (EJJ34_07135) | 1346616..1346879 | + | 264 | WP_003232653.1 | phage holin | - |
EJJ34_RS07135 (EJJ34_07140) | 1346892..1347785 | + | 894 | WP_003245230.1 | N-acetylmuramoyl-L-alanine amidase | - |
EJJ34_RS07140 (EJJ34_07145) | 1347822..1347959 | - | 138 | WP_003232648.1 | three component toxin-antitoxin-antitoxin system antitoxin SpoIISC | - |
EJJ34_RS07145 (EJJ34_07150) | 1348045..1348215 | - | 171 | WP_003232646.1 | three component toxin-antitoxin-antitoxin system antitoxin SpoIISB | Antitoxin |
EJJ34_RS07150 (EJJ34_07155) | 1348215..1348961 | - | 747 | WP_003244695.1 | toxin-antitoxin-antitoxin system toxin SpoIISA | Toxin |
EJJ34_RS07155 (EJJ34_07160) | 1349071..1350072 | - | 1002 | WP_065826289.1 | inorganic phosphate transporter | - |
EJJ34_RS07160 (EJJ34_07165) | 1350085..1350702 | - | 618 | WP_003218470.1 | DUF47 domain-containing protein | - |
EJJ34_RS07165 (EJJ34_07170) | 1350978..1352294 | - | 1317 | WP_003244819.1 | serine/threonine exchanger | - |
EJJ34_RS07170 (EJJ34_07175) | 1352683..1353633 | + | 951 | WP_003245086.1 | ring-cleaving dioxygenase | - |
EJJ34_RS07175 (EJJ34_07180) | 1353734..1353880 | + | 147 | WP_003244977.1 | hypothetical protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 249 a.a. Molecular weight: 36664.99 Da Isoelectric Point: 5.5500
>T116165 WP_003244695.1 NZ_CP034484:c1348961-1348215 [Bacillus subtilis subsp. subtilis NCIB 3610 = ATCC 6051 = DSM 10]
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FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
FFFFFFFFF
FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
FFFFFFFFF
Download Length: 747 bp
>T116165 NZ_CP034484:c1348961-1348215 [Bacillus subtilis subsp. subtilis NCIB 3610 = ATCC 6051 = DSM 10]
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Antitoxin
Download Length: 57 a.a. Molecular weight: 8407.08 Da Isoelectric Point: 5.5500
>AT116165 WP_003232646.1 NZ_CP034484:c1348215-1348045 [Bacillus subtilis subsp. subtilis NCIB 3610 = ATCC 6051 = DSM 10]
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Download Length: 171 bp
>AT116165 NZ_CP034484:c1348215-1348045 [Bacillus subtilis subsp. subtilis NCIB 3610 = ATCC 6051 = DSM 10]
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Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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