Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) rlegTA/AbiEii-AbiEi
Location 7510756..7511704 Replicon chromosome
Accession NZ_CP034448
Organism Mesorhizobium sp. M1B.F.Ca.ET.045.04.1.1

Toxin (Protein)


Gene name rlegT Uniprot ID -
Locus tag EJ071_RS36915 Protein ID WP_189521364.1
Coordinates 7511372..7511704 (+) Length 111 a.a.

Antitoxin (Protein)


Gene name rlegA Uniprot ID -
Locus tag EJ071_RS36910 Protein ID WP_126102231.1
Coordinates 7510756..7511382 (+) Length 209 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
EJ071_RS36890 7505932..7506918 - 987 WP_126102228.1 plasmid partitioning protein RepB -
EJ071_RS36895 7506953..7508197 - 1245 WP_126102229.1 plasmid partitioning protein RepA -
EJ071_RS39105 7508806..7508961 + 156 WP_210211898.1 hypothetical protein -
EJ071_RS36900 7509114..7510358 + 1245 WP_210211899.1 transposase -
EJ071_RS36905 7510342..7510626 - 285 WP_126102230.1 hypothetical protein -
EJ071_RS36910 7510756..7511382 + 627 WP_126102231.1 type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein Antitoxin
EJ071_RS36915 7511372..7511704 + 333 WP_189521364.1 nucleotidyl transferase AbiEii/AbiGii toxin family protein Toxin
EJ071_RS36920 7511713..7512186 + 474 WP_189521365.1 nucleotidyl transferase AbiEii/AbiGii toxin family protein -
EJ071_RS36925 7512534..7513622 - 1089 WP_126102234.1 hypothetical protein -
EJ071_RS36930 7514082..7514684 + 603 WP_126102235.1 hypothetical protein -
EJ071_RS36935 7515068..7516021 + 954 WP_126102236.1 DUF1403 family protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Nucleotidyl transferase AbiEii toxin, Type IV TA system

(38-103)

Antitoxin

Transcriptional regulator, AbiEi antitoxin

(18-56)


Sequences

Toxin        


Download         Length: 111 a.a.        Molecular weight: 12597.64 Da        Isoelectric Point: 10.0403

>T116080 WP_189521364.1 NZ_CP034448:7511372-7511704 [Mesorhizobium sp. M1B.F.Ca.ET.045.04.1.1]
MKDRPANLPASILARLRNIARNKQTDNQLILRRYAIERLLYRLSISPHRDQFILKGAMLFTAWLIDPFRPTQDLDLLGFG
NPAVAAIRSVFETICRIEAEKDGLVYDTNA

Download         Length: 333 bp

>T116080 NZ_CP034448:7511372-7511704 [Mesorhizobium sp. M1B.F.Ca.ET.045.04.1.1]
ATGAAGGATAGGCCGGCGAATCTTCCAGCATCGATTCTTGCTCGGCTCCGCAACATCGCGCGGAACAAGCAGACGGACAA
TCAGCTCATCCTGAGGCGATACGCCATCGAGAGGCTGCTTTATCGGCTGAGCATCTCCCCGCATCGCGATCAGTTCATCC
TGAAGGGCGCGATGCTCTTCACAGCGTGGCTCATCGATCCGTTTCGCCCTACGCAGGACCTCGATCTTCTCGGATTCGGC
AATCCGGCCGTAGCGGCGATCCGATCCGTTTTCGAAACGATTTGCCGGATCGAGGCCGAAAAAGACGGACTGGTGTACGA
TACGAACGCCTAA

Antitoxin


Download         Length: 209 a.a.        Molecular weight: 23291.94 Da        Isoelectric Point: 9.9163

>AT116080 WP_126102231.1 NZ_CP034448:7510756-7511382 [Mesorhizobium sp. M1B.F.Ca.ET.045.04.1.1]
MTESVETSQRDLAVGLIERHGIMRLSDLKRRGINPATLARLVDEGILHRPSRGLYERADADVDISHSLAEVATRVPKGVI
CLVSALQFHEITLQLPRSVWIAIGSKDRKPTIDYPPTRVARFGEKALTLGVKTYTIDSVPVRIFDPAKSIVDCFRFRNAV
GLDVAMEALRMGWRSRKAKPDDIARYAQALRIWSIVRPYLESTVADEG

Download         Length: 627 bp

>AT116080 NZ_CP034448:7510756-7511382 [Mesorhizobium sp. M1B.F.Ca.ET.045.04.1.1]
ATGACCGAATCCGTTGAAACCTCTCAGCGCGACCTTGCCGTCGGTCTGATTGAGCGCCACGGGATCATGCGCCTGTCGGA
CCTGAAACGCCGAGGCATCAATCCGGCTACACTGGCTCGTCTGGTTGACGAGGGCATCCTCCATCGCCCCTCACGAGGGC
TCTACGAACGCGCGGATGCCGACGTCGACATTTCTCATTCCCTGGCCGAAGTCGCGACCCGTGTTCCGAAAGGTGTGATC
TGCCTCGTATCGGCGCTCCAGTTTCATGAGATCACGCTGCAGCTTCCGCGCAGCGTCTGGATCGCAATCGGCTCCAAGGA
CCGCAAGCCGACGATCGACTATCCGCCCACCCGGGTTGCTCGCTTCGGCGAAAAGGCGCTCACCCTTGGCGTCAAGACCT
ACACCATCGATTCGGTACCTGTCCGGATCTTCGATCCGGCCAAATCGATCGTGGACTGCTTCCGCTTTCGCAACGCCGTC
GGCCTTGACGTTGCAATGGAAGCGCTGCGCATGGGATGGCGATCCAGAAAGGCTAAGCCCGACGACATTGCCCGATATGC
GCAGGCGCTGCGCATCTGGAGTATCGTTCGTCCTTATCTTGAAAGCACAGTTGCTGATGAAGGATAG

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References