Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) tacT-ataR/DUF1778(antitoxin)
Location 6295439..6296205 Replicon chromosome
Accession NZ_CP034448
Organism Mesorhizobium sp. M1B.F.Ca.ET.045.04.1.1

Toxin (Protein)


Gene name tacT Uniprot ID -
Locus tag EJ071_RS31420 Protein ID WP_126101321.1
Coordinates 6295720..6296205 (+) Length 162 a.a.

Antitoxin (Protein)


Gene name ataR Uniprot ID -
Locus tag EJ071_RS31415 Protein ID WP_126101320.1
Coordinates 6295439..6295720 (+) Length 94 a.a.

Genomic Context

EJ071_RS31395EJ071_RS31400EJ071_RS31410EJ071_RS31415EJ071_RS31420EJ071_RS31435EJ071_RS31440EJ071_RS31405EJ071_RS31425EJ071_RS31430
Location: 6290487..6292610 (2124 bp)
Type: Others
Protein ID: WP_126101317.1
Location: 6292671..6292913 (243 bp)
Type: Others
Protein ID: WP_126102796.1
Location: 6293883..6295259 (1377 bp)
Type: Others
Protein ID: WP_126101319.1
Location: 6295439..6295720 (282 bp)
Type: Antitoxin
Protein ID: WP_126101320.1
Location: 6295720..6296205 (486 bp)
Type: Toxin
Protein ID: WP_126101321.1
Location: 6298670..6299260 (591 bp)
Type: Others
Protein ID: WP_126101324.1
Location: 6299257..6300786 (1530 bp)
Type: Others
Protein ID: WP_126101325.1
Location: 6293294..6293776 (483 bp)
Type: Others
Protein ID: WP_126101318.1
Location: 6296255..6297259 (1005 bp)
Type: Others
Protein ID: WP_126101322.1
Location: 6297316..6298482 (1167 bp)
Type: Others
Protein ID: WP_126101323.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
EJ071_RS313956290487..6292610+2124WP_126101317.1methylmalonyl-CoA mutase-
EJ071_RS314006292671..6292913+243WP_126102796.1AbrB/MazE/SpoVT family DNA-binding domain-containing protein-
EJ071_RS314056293294..6293776-483WP_126101318.1transcription elongation factor GreA-
EJ071_RS314106293883..6295259+1377WP_126101319.1TIGR03808 family TAT-translocated repetitive protein-
EJ071_RS314156295439..6295720+282WP_126101320.1DUF1778 domain-containing proteinAntitoxin
EJ071_RS314206295720..6296205+486WP_126101321.1GNAT family N-acetyltransferaseToxin
EJ071_RS314256296255..6297259-1005WP_126101322.1asparaginase-
EJ071_RS314306297316..6298482-1167WP_126101323.1acetyl-CoA acetyltransferase-
EJ071_RS314356298670..6299260+591WP_126101324.1transcriptional regulator BetI-
EJ071_RS314406299257..6300786+1530WP_126101325.1choline-sulfatase-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

GNAT domain

(41-142)

Antitoxin

Vibrio phage ICP1, Orf50

(14-77)


Sequences

Toxin        


Download         Length: 162 a.a.        Molecular weight: 17143.72 Da        Isoelectric Point: 9.4398

>T116079 WP_126101321.1 NZ_CP034448:6295720-6296205 [Mesorhizobium sp. M1B.F.Ca.ET.045.04.1.1]
MLSAPALLADSHELDLFQSGTDSLDQWLRRRARANQVSGASRTYVIAESARVVGYYCLSSGGLDLADAPGSIRRNMPDPV
PMAVLGRLAVDASWQGKGLGVALLQDAVLRTGQAAAILGIRGLLVHAISDEAKAFYERYGFQASPKSPMTLVLSLKMAQK
G

Download         Length: 486 bp

>T116079 NZ_CP034448:6295720-6296205 [Mesorhizobium sp. M1B.F.Ca.ET.045.04.1.1]
ATGCTATCGGCACCAGCCCTTCTTGCCGATAGTCACGAACTCGACCTTTTTCAAAGCGGGACCGACAGCCTGGATCAATG
GCTTCGACGGCGGGCGCGCGCCAATCAAGTCAGCGGGGCGTCCAGAACCTATGTGATTGCAGAAAGCGCGCGCGTTGTTG
GTTACTATTGCCTTTCATCAGGCGGACTTGACCTGGCGGATGCGCCCGGTTCGATCCGGCGTAATATGCCCGATCCCGTG
CCCATGGCCGTACTTGGCCGCTTGGCTGTCGATGCAAGCTGGCAGGGAAAGGGCCTGGGCGTCGCTTTGTTGCAGGACGC
GGTGCTGCGGACCGGTCAAGCGGCAGCCATTCTCGGCATTCGTGGTCTCTTGGTTCACGCCATATCGGACGAAGCCAAAG
CGTTTTATGAGCGGTATGGCTTCCAGGCTTCTCCAAAAAGTCCGATGACTTTGGTGCTATCGCTGAAGATGGCTCAGAAG
GGGTAA

Antitoxin


Download         Length: 94 a.a.        Molecular weight: 10682.16 Da        Isoelectric Point: 8.5141

>AT116079 WP_126101320.1 NZ_CP034448:6295439-6295720 [Mesorhizobium sp. M1B.F.Ca.ET.045.04.1.1]
MATKNQDTHAKPVNLRIREDVRILIDRAAKIRGKTRSDFMIDAAYRAAEDTLLDQTLVKVDAESYQHYLDILDRPPSGEG
FARLMNAPKPWRD

Download         Length: 282 bp

>AT116079 NZ_CP034448:6295439-6295720 [Mesorhizobium sp. M1B.F.Ca.ET.045.04.1.1]
ATGGCCACGAAAAACCAGGATACCCACGCCAAGCCCGTCAATCTGCGCATCCGCGAGGATGTCCGCATCCTGATCGACCG
CGCCGCGAAGATACGCGGCAAGACCCGCTCCGACTTCATGATCGACGCCGCTTATCGTGCAGCCGAAGACACGCTGCTCG
ACCAGACGCTCGTCAAGGTCGATGCCGAAAGCTATCAGCATTATCTCGATATCCTCGATCGGCCACCGAGCGGCGAGGGA
TTTGCCCGTCTGATGAATGCGCCTAAGCCTTGGCGGGACTGA

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
No matching records found

Antitoxin

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Source
ID
Structure
No matching records found

References